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RPL4
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:361.0 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:231.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA034600
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

361.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 361.0
Samples: 300

Max nTPM: 819.1
Min nTPM: 177.7
Std nTPM: 111.6
Median nTPM: 338.0
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 819.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 698.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 692.3
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 687.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 682.6
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 667.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 658.9
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 648.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 644.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 637.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 632.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 630.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 626.1
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 611.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 610.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 604.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 590.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 564.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 563.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 562.9
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 552.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 536.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 535.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 524.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 514.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 510.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 509.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 508.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 504.9
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 501.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 499.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 497.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 495.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 492.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 491.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 484.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 483.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 483.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 479.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 479.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 475.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 473.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 471.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 467.8
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 467.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 464.9
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 464.8
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 463.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 461.5
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 459.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 456.8
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 456.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 456.4
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 454.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 449.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 447.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 447.3
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 446.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 446.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 443.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 443.0
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 441.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 440.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 439.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 437.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 437.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 431.7
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 429.1
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 427.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 427.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 426.4
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 426.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 425.2
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 423.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 422.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 421.0
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 421.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 419.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 419.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 418.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 414.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 413.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 411.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 411.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 411.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 408.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 407.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 407.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 404.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 402.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 401.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 400.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 400.3
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 399.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 398.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 397.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 397.2
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 396.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 396.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 392.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 391.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 391.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 391.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 390.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 390.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 389.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 387.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 384.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 383.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 382.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 382.7
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 381.9
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 381.4
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 380.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 379.2
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 379.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 378.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 377.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 377.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 375.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 375.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 374.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 373.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 372.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 371.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 370.6
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 368.8
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 368.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 366.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 365.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 364.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 355.4
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 354.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 353.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 352.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 351.9
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 350.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 350.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 350.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 347.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 346.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 345.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 345.0
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 344.8
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 340.5
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 339.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 339.5
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 339.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 339.4
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 338.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 337.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 337.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 337.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 334.9
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 334.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 333.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 331.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 331.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 331.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 330.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 330.6
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 330.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 330.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 328.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 328.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 327.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 326.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 326.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 323.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 323.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 323.3
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 322.3
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 321.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 319.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 316.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 315.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 314.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 314.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 312.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 310.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 309.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 309.4
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 309.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 308.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 308.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 307.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 307.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 306.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 306.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 305.9
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 304.5
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 303.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 303.2
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 302.1
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 299.5
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 298.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 298.6
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 298.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 293.7
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 293.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 291.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 291.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 291.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 290.7
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 290.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 290.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 290.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 289.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 289.2
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 289.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 287.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 287.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 285.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 284.4
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 284.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 283.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 282.6
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 282.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 281.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 280.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 280.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 280.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 279.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 279.0
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 279.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 278.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 277.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 275.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 274.6
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 273.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 273.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 272.3
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 271.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 270.8
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 270.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 270.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 270.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 269.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 269.0
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 267.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 267.4
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 267.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 266.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 263.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 262.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 262.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 261.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 261.0
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 260.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 259.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 259.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 256.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 256.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 255.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 255.7
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 255.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 254.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 252.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 251.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 249.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 248.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 248.2
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 246.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 246.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 244.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 243.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 241.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 239.8
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 239.2
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 238.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 237.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 237.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 234.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 232.6
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 232.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 231.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 230.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 229.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 229.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 229.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 229.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 225.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 222.7
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 220.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 219.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 214.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 213.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 212.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 211.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 211.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 211.0
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 210.5
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 204.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 203.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 203.2
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 202.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 200.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 197.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 196.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 177.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 20.7
FF:10164-103B2 76 years, female 20.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.3
Pig sample Sample description nTPM
Caudate
nTPM: 231.3
Samples: 4

Max nTPM: 243.2
Min nTPM: 208.7
Sample A Female 243.2
Sample B Female 232.4
Sample C Male 240.8
Sample D Male 208.7

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