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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1160.6 nTPM
HPA:1160.6 nTPM
GTEx:552.0 nTPM
FANTOM5:73.0 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA034600
Glandular cells Low



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1160.6
overview
Female, age 68
Salivary gland sample 216
nTPM: 1027.7
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1236.7
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1217.4
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

552.0
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 552.0
Samples: 181

Max nTPM: 1071.6
Min nTPM: 274.8
Std nTPM: 112.1
Median nTPM: 532.5
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 1071.6
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 985.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 947.5
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 879.2
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 865.5
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 864.7
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 844.9
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 808.4
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 763.8
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 755.0
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 747.6
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 742.1
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 734.4
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 733.2
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 724.3
GTEX-146FR-1226-SM-5MR78 60-69 years, female 710.6
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 705.9
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 692.3
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 662.7
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 660.3
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 653.9
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 653.6
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 638.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 634.3
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 631.4
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 631.2
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 631.1
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 629.2
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 623.9
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 620.4
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 613.8
GTEX-15SHV-2226-SM-6M464 60-69 years, male 612.8
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 608.4
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 606.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 604.7
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 602.6
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 602.4
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 601.3
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 599.8
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 598.3
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 597.9
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 596.8
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 595.4
GTEX-1445S-2926-SM-5O993 60-69 years, male 593.2
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 593.2
GTEX-13113-1526-SM-5EGHV 60-69 years, female 590.8
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 589.3
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 589.1
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 588.1
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 587.5
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 586.0
GTEX-11P82-0926-SM-5986X 20-29 years, male 584.6
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 584.1
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 584.0
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 584.0
GTEX-Y111-2626-SM-4TT24 50-59 years, male 583.7
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 583.2
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 579.3
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 577.5
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 577.1
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 572.4
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 572.3
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 570.1
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 569.3
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 567.2
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 558.9
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 555.5
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 555.0
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 554.3
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 552.9
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 550.6
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 550.3
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 548.7
GTEX-1B932-0626-SM-731EM 40-49 years, female 548.5
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 548.0
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 547.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 546.5
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 546.1
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 544.8
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 543.2
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 541.8
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 541.5
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 539.4
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 538.9
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 538.3
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 538.1
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 537.9
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 537.1
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 536.2
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 534.0
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 532.5
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 530.3
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 529.9
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 528.7
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 528.7
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 528.4
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 528.2
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 528.1
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 528.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 526.7
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 526.6
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 525.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 525.5
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 525.4
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 523.6
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 523.0
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 521.0
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 520.9
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 518.3
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 514.9
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 514.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 514.7
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 511.3
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 511.2
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 509.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 507.7
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 507.7
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 505.6
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 505.4
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 504.8
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 504.5
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 504.0
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 503.9
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 503.7
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 503.4
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 502.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 502.1
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 500.5
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 497.9
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 497.5
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 496.9
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 495.6
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 495.3
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 494.7
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 492.1
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 491.6
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 486.7
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 484.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 482.9
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 482.8
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 482.6
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 482.0
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 479.3
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 478.0
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 477.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 475.8
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 474.0
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 471.8
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 471.6
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 471.3
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 470.2
GTEX-X261-2426-SM-4PQZU 50-59 years, male 467.7
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 465.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 463.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 456.4
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 456.4
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 456.1
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 450.8
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 449.4
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 448.7
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 447.5
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 447.4
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 447.2
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 440.7
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 439.4
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 435.2
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 429.7
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 427.8
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 424.5
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 417.0
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 413.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 411.0
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 410.1
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 408.3
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 402.8
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 401.7
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 376.7
GTEX-178AV-1426-SM-6LLID 40-49 years, male 361.4
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 359.3
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 338.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 274.8
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

73.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 73.0
FF:10199-103F1 23 years, male 73.0
Salivary gland
Scaled Tags Per Million: 44.9
FF:10093-102C3 16-60 years, mixed 44.9
Submaxillary gland
Scaled Tags Per Million: 37.1
FF:10202-103F4 24 years, male 37.1

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