HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:381.7 nTPM
HPA Brain:170.6 nTPM
GTEx:381.7 nTPM
FANTOM5:15.3 Scaled Tags Per Million
Pig:360.2 nTPM
Mouse:669.7 nTPM
Allen mouse:17.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034600
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 170.6
Sample id Sample description nTPM
Hippocampus
nTPM: 124.9
2529 Female, age 94, left hemisphere 219.4
1898 Male, age 80, left hemisphere 166.6
1855 Male, age 76, left hemisphere 123.6
1911 Female, age 85, right hemisphere 122.5
2148 Female, age 91, left hemisphere 79.9
2621 Female, age 67, right hemisphere 37.6
Dentate gyrus
nTPM: 170.6
2530 Female, age 94, left hemisphere 322.2
2531 Female, age 67, both hemispheres 192.9
1927 Female, age 91, both hemispheres 153.7
2246 Female, age 85, both hemispheres 125.5
2528 Male, age 74, both hemispheres 123.6
2010 Male, age 76, both hemispheres 105.7
Entorhinal gyrus
nTPM: 106.7
2686 Male, age 75, right hemisphere 172.8
1938 Female, age 85, left hemisphere 158.3
1787 Male, age 76, left hemisphere 148.1
2764 Male, age 80, right hemisphere 77.9
2613 Female, age 94, left hemisphere 49.6
2117 Female, age 91, right hemisphere 33.7
Hippocampus, CA1
nTPM: 96.7
2527 Male, age 74, both hemispheres 168.3
1873 Female, age 85, both hemispheres 102.6
2749 Male, age 80, left hemisphere 95.4
2082 Female, age 91, right hemisphere 71.5
2045 Male, age 76, both hemispheres 45.8
Hippocampus, CA2
nTPM: 129.1
2437 Female, age 94, left hemisphere 226.1
2249 Male, age 74, both hemispheres 166.3
1940 Female, age 85, left hemisphere 128.0
1892 Male, age 76, both hemispheres 123.1
2113 Female, age 91, right hemisphere 94.2
1963 Male, age 80, left hemisphere 37.1
Hippocampus, CA3
nTPM: 110.6
2436 Male, age 74, both hemispheres 176.5
1867 Male, age 76, both hemispheres 135.8
1891 Female, age 85, both hemispheres 110.8
2861 Female, age 67, both hemispheres 85.8
2137 Male, age 80, left hemisphere 77.3
2620 Female, age 94, left hemisphere 77.2
Parahippocampal cortex
nTPM: 122.5
1850 Male, age 80, both hemispheres 182.4
2250 Female, age 67, right hemisphere 170.8
2532 Female, age 72, left hemisphere 163.9
2245 Female, age 91, both hemispheres 138.1
2692 Male, age 74, both hemispheres 125.5
1933 Female, age 85, both hemispheres 121.6
1990 Female, age 91, right hemisphere 109.0
2018 Male, age 76, both hemispheres 97.2
2693 Female, age 94, both hemispheres 83.6
2622 Female, age 67, right hemisphere 33.3
Perirhinal gyrus
nTPM: 166.4
1794 Male, age 80, right hemisphere 191.9
2521 Female, age 94, right hemisphere 174.6
1847 Female, age 91, left hemisphere 173.2
2848 Male, age 76, right hemisphere 148.7
1841 Female, age 85, right hemisphere 143.7
Subiculum
nTPM: 105.1
2438 Female, age 94, left hemisphere 222.0
1977 Female, age 85, both hemispheres 136.7
1901 Male, age 80, both hemispheres 121.8
2042 Male, age 76, both hemispheres 73.0
2729 Female, age 91, right hemisphere 57.1
2619 Male, age 74, both hemispheres 20.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 381.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 381.7
Samples: 255

Max nTPM: 760.6
Min nTPM: 162.2
Std nTPM: 107.5
Median nTPM: 361.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 760.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 741.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 730.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 711.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 676.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 662.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 641.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 639.8
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 635.0
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 602.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 600.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.3
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 12.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 360.2
Pig sample Sample description nTPM
Subiculum
nTPM: 296.1
Samples: 4

Max nTPM: 415.0
Min nTPM: 246.5
Sample A Female 415.0
Sample B Female 266.0
Sample C Male 246.5
Sample D Male 256.8
Dorsal hippocampus
nTPM: 360.2
Samples: 4

Max nTPM: 449.1
Min nTPM: 305.3
Sample A Female 449.1
Sample B Female 346.6
Sample C Male 339.8
Sample D Male 305.3
Entorhinal cortex
nTPM: 283.0
Samples: 4

Max nTPM: 342.3
Min nTPM: 218.9
Sample A Female 273.4
Sample B Female 342.3
Sample C Male 297.4
Sample D Male 218.9
Ventral hippocampus
nTPM: 314.4
Samples: 4

Max nTPM: 347.4
Min nTPM: 284.8
Sample A Female 318.1
Sample B Female 284.8
Sample C Male 307.3
Sample D Male 347.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 669.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 646.4
Samples: 4

Max nTPM: 689.0
Min nTPM: 617.2
Sample A Male 659.1
Sample B Male 620.4
Sample C Female 689.0
Sample D Female 617.2
Hippocampal formation
nTPM: 669.7
Samples: 4

Max nTPM: 739.0
Min nTPM: 614.5
Sample A Male 739.0
Sample B Male 649.5
Sample C Female 675.9
Sample D Female 614.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
69095958 Antisense, RP_050324_02_E07, Mouse strain C57BL/6J (56 days, male) 17.4

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