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  • UGT8
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:244.3 nTPM
HPA Brain:293.8 nTPM
GTEx:244.3 nTPM
FANTOM5:398.3 Scaled Tags Per Million
Pig:401.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

293.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 229.6
1981 Female, age 72, midline 291.7
2816 Male, age 47, midline 247.7
2048 Male, age 55, midline 245.6
2194 Female, age 79, both hemispheres 224.7
2565 Male, age 75, midline 138.5
Cervical spinal cord, dorsal horn
nTPM: 293.8
2296 Male, age 66, both hemispheres 573.5
2173 Female, age 72, unknown 405.3
2069 Male, age 47, both hemispheres 280.2
1877 Male, age 55, unknown 230.2
2721 Male, age 90, both hemispheres 143.9
2297 Male, age 75, both hemispheres 129.9
Cervical spinal cord, ventral horn
nTPM: 254.9
2068 Male, age 55, unknown 316.9
2098 Female, age 72, unknown 301.4
2820 Female, age 79, both hemispheres 256.6
2480 Male, age 75, both hemispheres 225.8
2295 Male, age 66, both hemispheres 217.3
2809 Male, age 90, both hemispheres 211.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 244.3
Samples: 204

Max nTPM: 603.4
Min nTPM: 35.3
Std nTPM: 110.9
Median nTPM: 237.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 603.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 518.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 491.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 483.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 465.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 463.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 454.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 453.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 437.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 437.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 436.5
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 435.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 432.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 423.2
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 422.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 418.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 416.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 416.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 413.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 404.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 400.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 398.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 396.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 395.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 380.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 374.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 372.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 371.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 368.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 365.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 362.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 356.8
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 354.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 352.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 351.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 350.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 344.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 343.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 342.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 342.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 342.4
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 338.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 336.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 336.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 334.5
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 333.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 327.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 322.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 320.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 320.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 319.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 315.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 314.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 308.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 308.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 308.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 307.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 307.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 307.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 306.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 306.1
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 305.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 304.0
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 302.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 300.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 298.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 297.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 294.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 292.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 289.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 289.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 285.7
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 285.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 283.8
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 282.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 281.9
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 278.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 273.5
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 272.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 271.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 270.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 266.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 262.0
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 259.9
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 259.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 259.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 256.0
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 252.8
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 252.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 251.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 251.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 250.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 249.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 248.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 246.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 246.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 245.7
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 245.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 240.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 240.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 240.5
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 237.4
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 237.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 236.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 236.9
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 235.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 235.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 233.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 231.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 230.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 230.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 229.0
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 228.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 225.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 223.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 223.3
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 222.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 220.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 214.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 213.3
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 210.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 210.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 207.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 207.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 204.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 204.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 204.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 202.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 198.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 198.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 195.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 195.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 195.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 194.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 192.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 191.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 188.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 186.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 182.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 182.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 181.4
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 179.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 179.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 175.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 172.7
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 172.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 171.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 171.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 167.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 166.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 166.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 165.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 162.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 158.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 156.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 151.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 151.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 150.4
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 149.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 146.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 144.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 143.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 142.6
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 142.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 138.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 133.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 130.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 126.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 123.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 123.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 123.3
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 123.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 120.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 120.0
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 119.4
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 110.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 109.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 109.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 105.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 104.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 103.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 103.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 102.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 101.0
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 101.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 100.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 99.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 97.3
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 95.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 93.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 92.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 89.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 86.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 79.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 70.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 69.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 68.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 61.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 59.3
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 50.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 41.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 41.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 39.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 35.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

398.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 398.3
FF:10181-103D1 60 years, female 472.3
FF:10159-103A6 76 years, female 324.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 348.5
Samples: 4

Max nTPM: 385.0
Min nTPM: 302.8
Sample A Female 326.5
Sample B Female 379.7
Sample C Male 302.8
Sample D Male 385.0
Ventral spinal cord
nTPM: 401.7
Samples: 4

Max nTPM: 530.2
Min nTPM: 298.7
Sample A Female 430.8
Sample B Female 347.1
Sample C Male 298.7
Sample D Male 530.2

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