HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:166.0 nTPM
HPA Brain:103.0 nTPM
GTEx:166.0 nTPM
FANTOM5:47.6 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:113.4 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042672
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 103.0
Sample id Sample description nTPM
Hippocampus
nTPM: 92.0
1898 Male, age 80, left hemisphere 118.2
2529 Female, age 94, left hemisphere 97.4
1855 Male, age 76, left hemisphere 90.3
2621 Female, age 67, right hemisphere 87.0
1911 Female, age 85, right hemisphere 85.7
2148 Female, age 91, left hemisphere 73.2
Dentate gyrus
nTPM: 91.0
2010 Male, age 76, both hemispheres 98.3
2530 Female, age 94, left hemisphere 97.6
2528 Male, age 74, both hemispheres 96.8
1927 Female, age 91, both hemispheres 92.1
2246 Female, age 85, both hemispheres 81.6
2531 Female, age 67, both hemispheres 79.7
Entorhinal gyrus
nTPM: 91.0
2764 Male, age 80, right hemisphere 108.6
1938 Female, age 85, left hemisphere 102.8
1787 Male, age 76, left hemisphere 91.4
2613 Female, age 94, left hemisphere 82.6
2117 Female, age 91, right hemisphere 80.5
2686 Male, age 75, right hemisphere 79.9
Hippocampus, CA1
nTPM: 95.4
2749 Male, age 80, left hemisphere 125.8
2527 Male, age 74, both hemispheres 91.8
1873 Female, age 85, both hemispheres 88.8
2082 Female, age 91, right hemisphere 87.5
2045 Male, age 76, both hemispheres 82.8
Hippocampus, CA2
nTPM: 94.6
2249 Male, age 74, both hemispheres 113.0
1892 Male, age 76, both hemispheres 104.9
2437 Female, age 94, left hemisphere 93.2
1963 Male, age 80, left hemisphere 91.9
2113 Female, age 91, right hemisphere 85.3
1940 Female, age 85, left hemisphere 79.0
Hippocampus, CA3
nTPM: 90.7
2436 Male, age 74, both hemispheres 108.4
2137 Male, age 80, left hemisphere 104.6
1867 Male, age 76, both hemispheres 97.3
1891 Female, age 85, both hemispheres 80.0
2861 Female, age 67, both hemispheres 77.8
2620 Female, age 94, left hemisphere 76.1
Parahippocampal cortex
nTPM: 88.3
2245 Female, age 91, both hemispheres 98.2
1990 Female, age 91, right hemisphere 96.4
1850 Male, age 80, both hemispheres 95.5
2250 Female, age 67, right hemisphere 93.7
1933 Female, age 85, both hemispheres 93.5
2018 Male, age 76, both hemispheres 89.2
2692 Male, age 74, both hemispheres 86.6
2532 Female, age 72, left hemisphere 85.7
2622 Female, age 67, right hemisphere 77.3
2693 Female, age 94, both hemispheres 67.4
Perirhinal gyrus
nTPM: 103.0
1847 Female, age 91, left hemisphere 126.4
1794 Male, age 80, right hemisphere 114.0
1841 Female, age 85, right hemisphere 94.3
2521 Female, age 94, right hemisphere 91.6
2848 Male, age 76, right hemisphere 88.9
Subiculum
nTPM: 88.9
1901 Male, age 80, both hemispheres 103.4
1977 Female, age 85, both hemispheres 96.9
2619 Male, age 74, both hemispheres 91.1
2438 Female, age 94, left hemisphere 90.3
2042 Male, age 76, both hemispheres 78.3
2729 Female, age 91, right hemisphere 73.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 166.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 166.0
Samples: 255

Max nTPM: 400.1
Min nTPM: 46.8
Std nTPM: 50.3
Median nTPM: 157.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 400.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 342.6
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 342.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 315.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 312.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 307.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 299.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 296.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 294.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 286.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 285.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.6
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 44.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.5
Pig sample Sample description nTPM
Subiculum
nTPM: 29.8
Samples: 4

Max nTPM: 40.1
Min nTPM: 25.4
Sample A Female 40.1
Sample B Female 27.1
Sample C Male 26.6
Sample D Male 25.4
Dorsal hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 51.1
Min nTPM: 24.1
Sample A Female 51.1
Sample B Female 35.2
Sample C Male 35.7
Sample D Male 24.1
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 37.2
Min nTPM: 22.9
Sample A Female 31.1
Sample B Female 37.2
Sample C Male 31.4
Sample D Male 22.9
Ventral hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 40.5
Min nTPM: 24.0
Sample A Female 37.6
Sample B Female 24.0
Sample C Male 40.5
Sample D Male 34.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 113.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.3
Samples: 4

Max nTPM: 120.9
Min nTPM: 105.8
Sample A Male 105.8
Sample B Male 108.7
Sample C Female 120.9
Sample D Female 113.8
Hippocampal formation
nTPM: 113.4
Samples: 4

Max nTPM: 134.5
Min nTPM: 98.7
Sample A Male 134.5
Sample B Male 98.7
Sample C Female 106.6
Sample D Female 113.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68844217 Antisense, RP_050222_01_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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