We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MARCKSL1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MARCKSL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:301.4 nTPM
HPA Brain:482.0 nTPM
GTEx:301.4 nTPM
Pig:372.5 nTPM
Mouse:136.6 nTPM
Allen mouse:7.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

482.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 153.0
1961 Female, age 42, unknown 164.2
2226 Male, age 75, left hemisphere 141.7
Dorsomedial nucleus
nTPM: 267.5
2017 Female, age 42, unknown 336.1
1989 Male, age 62, unknown 298.9
2041 Female, age 72, unknown 167.7
Lateral hypothalamic area
nTPM: 295.7
2228 Male, age 66, unknown 404.3
2271 Male, age 75, both hemispheres 327.8
1791 Male, age 80, right hemisphere 248.6
2412 Male, age 62, unknown 202.0
Mammillary body
nTPM: 482.0
1834 Female, age 42, unknown 591.7
1945 Male, age 80, right hemisphere 559.1
1948 Female, age 72, unknown 493.2
1923 Female, age 72, unknown 400.1
2413 Male, age 66, unknown 365.8
Paraventricular nucleus
nTPM: 425.5
2700 Male, age 62, unknown 425.5
Preoptic area
nTPM: 341.0
2414 Female, age 72, unknown 454.1
1861 Female, age 42, unknown 370.1
1907 Male, age 80, right hemisphere 198.8
Supraoptic nucleus
nTPM: 349.5
2043 Male, age 62, unknown 446.1
1894 Female, age 72, unknown 339.3
2835 Female, age 72, unknown 263.1
Ventromedial nucleus
nTPM: 154.5
1822 Female, age 42, unknown 157.0
1982 Female, age 72, unknown 152.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

301.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 301.4
Samples: 257

Max nTPM: 1024.4
Min nTPM: 69.5
Std nTPM: 155.9
Median nTPM: 263.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1024.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 938.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 829.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 774.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 745.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 709.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 684.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 680.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 679.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 676.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 648.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 629.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 603.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 599.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 596.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 595.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 581.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 570.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 568.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 565.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 564.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 564.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 555.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 551.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 551.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 541.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 529.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 528.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 510.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 506.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 500.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 499.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 491.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 488.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 486.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 475.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 475.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 472.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 467.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 465.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 465.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 448.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 438.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 429.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 428.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 427.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 427.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 426.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 422.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 421.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 419.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 415.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 406.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 403.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 396.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 395.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 391.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 386.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 385.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 374.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 367.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 365.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 363.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 363.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 361.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 358.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 352.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 343.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 342.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 339.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 339.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 338.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 338.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 332.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 322.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 322.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 321.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 320.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 319.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 318.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 317.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 317.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 316.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 311.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 310.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 308.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 306.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 305.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 304.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 303.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 298.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 297.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 297.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 295.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 290.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 290.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 289.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 289.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 285.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 283.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 280.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 280.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 279.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 278.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 277.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 277.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 276.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 275.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 275.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 274.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 273.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 273.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 272.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 272.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 270.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 269.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 269.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 269.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 269.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 269.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 268.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 267.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 266.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 265.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 265.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 265.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 265.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 265.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 263.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 261.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 260.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 258.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 257.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 256.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 256.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 256.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 253.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 253.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 253.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 252.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 249.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 249.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 247.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 247.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 245.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 245.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 241.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 239.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 235.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 234.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 233.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 233.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 232.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 231.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 231.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 231.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 229.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 229.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 227.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 227.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 225.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 225.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 224.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 222.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 221.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 219.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 219.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 213.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 212.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 212.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 212.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 211.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 210.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 209.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 208.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 207.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 207.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 206.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 204.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 204.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 203.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 203.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 203.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 202.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 202.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 201.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 200.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 200.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 199.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 198.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 197.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 193.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 193.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 193.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 191.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 190.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 189.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 189.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 188.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 188.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 187.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 185.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 183.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 179.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 178.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 177.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 176.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 174.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 174.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 173.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 173.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 172.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 172.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 172.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 172.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 170.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 169.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 168.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 168.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 167.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 167.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 166.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 165.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 165.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 165.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 164.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 164.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 160.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 160.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 158.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 157.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 157.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 156.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 155.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 154.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 152.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 150.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 150.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 149.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 149.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 140.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 136.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 135.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 133.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 133.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 133.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 129.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 129.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 128.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 125.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 124.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 122.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 121.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 100.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 99.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 97.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 69.5
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

372.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 372.6
Samples: 4

Max nTPM: 435.9
Min nTPM: 227.6
Sample A Female 427.3
Sample B Female 399.4
Sample C Male 435.9
Sample D Male 227.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 136.7
Samples: 4

Max nTPM: 151.7
Min nTPM: 127.4
Sample A Male 137.4
Sample B Male 151.7
Sample C Female 130.1
Sample D Female 127.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.0
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 7.0
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 5.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo