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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CALCB
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:2.7 nTPM
GTEx:0.4 nTPM
FANTOM5:1.0 Scaled Tags Per Million
Macaque:0.2 nTPM
Pig:3.3 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.7
Sample id Sample description nTPM
Putamen
nTPM: 2.7
2489 Female, age 72, unknown 4.1
2466 Female, age 79, unknown 3.1
2647 Male, age 75, left hemisphere 3.0
1838 Male, age 80, right hemisphere 2.5
1937 Female, age 91, right hemisphere 2.3
1829 Male, age 74, unknown 2.1
2482 Female, age 94, left hemisphere 2.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 0.4
Samples: 254

Max nTPM: 8.0
Min nTPM: 0.0
Std nTPM: 0.8
Median nTPM: 0.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 8.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 4.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 3.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 3.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 3.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 3.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 0.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 0.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 0.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 0.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 0.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 0.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 0.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 0.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 0.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 0.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 0.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 0.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 0.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 0.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 0.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 0.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 0.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 0.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 0.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 0.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 0.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 0.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 0.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 0.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 0.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 0.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 0.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 0.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 0.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 0.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 0.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 0.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 0.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 0.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 0.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 0.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 0.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 0.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 0.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 0.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 0.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 0.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 0.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 0.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 0.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 0.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 0.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 0.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 0.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 0.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 0.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 0.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 0.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 0.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 0.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 0.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 0.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 0.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 0.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 0.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 0.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 0.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 0.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 0.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 0.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 0.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 0.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 0.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 0.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 0.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 0.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 0.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 0.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 0.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 0.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 0.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 0.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 0.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 0.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 0.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 0.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 0.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 0.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 0.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 0.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 0.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 0.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 0.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 0.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 0.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 0.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 0.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 0.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 0.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 0.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 0.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 0.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 0.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 0.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 0.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 0.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 0.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 0.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 0.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 0.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 0.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 0.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 0.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 0.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 0.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 0.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 0.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 0.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 0.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 0.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 0.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 0.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 0.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 0.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 0.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 0.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 0.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 0.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 0.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 0.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 0.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 0.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 0.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 0.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 0.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 0.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 0.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 0.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 0.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 0.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 0.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 0.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 0.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 0.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 0.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 0.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 0.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 0.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 0.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 0.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 0.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 0.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 0.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 0.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 0.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 0.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 0.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 0.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 0.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 0.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 0.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 0.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 0.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 0.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 0.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 0.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 0.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 0.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 0.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 0.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 0.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 0.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 0.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 0.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 0.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 0.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 0.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 0.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 0.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 0.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 0.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 0.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 0.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 0.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 0.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 0.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 0.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 0.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 0.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 0.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 0.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 0.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 0.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 0.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 0.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 0.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 0.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 0.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 0.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 0.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 0.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 0.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 0.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 0.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 0.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 0.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 0.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 0.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 0.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 0.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 0.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 0.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 0.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 0.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 0.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 0.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 0.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 0.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 0.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 0.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 0.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 0.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 0.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 0.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 0.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 0.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 0.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 0.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 0.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 0.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 0.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 0.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1.0
FF:10176-103C5 60 years, female 1.0

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.2
Macaque sample Sample description nTPM
Putamen
nTPM: 0.2
Samples: 2

Max nTPM: 0.2
Min nTPM: 0.1
Sample A 0.2
Sample B 0.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.3
Pig sample Sample description nTPM
Putamen
nTPM: 3.3
Samples: 3

Max nTPM: 6.0
Min nTPM: 1.9
Sample B Female 6.0
Sample C Male 1.9
Sample D Male 1.9

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