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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:102.6 nTPM
HPA Brain:126.8 nTPM
GTEx:102.6 nTPM
Pig:95.7 nTPM
Mouse:101.9 nTPM
Allen mouse:8.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 98.6
2226 Male, age 75, left hemisphere 124.0
1961 Female, age 42, unknown 73.1
Dorsomedial nucleus
nTPM: 104.0
1989 Male, age 62, unknown 141.7
2041 Female, age 72, unknown 92.6
2017 Female, age 42, unknown 77.6
Lateral hypothalamic area
nTPM: 108.4
1791 Male, age 80, right hemisphere 137.4
2271 Male, age 75, both hemispheres 132.8
2228 Male, age 66, unknown 99.0
2412 Male, age 62, unknown 64.5
Mammillary body
nTPM: 126.8
1923 Female, age 72, unknown 161.7
2413 Male, age 66, unknown 126.8
1948 Female, age 72, unknown 119.8
1945 Male, age 80, right hemisphere 117.2
1834 Female, age 42, unknown 108.4
Paraventricular nucleus
nTPM: 63.2
2700 Male, age 62, unknown 63.2
Preoptic area
nTPM: 98.3
1907 Male, age 80, right hemisphere 107.6
2414 Female, age 72, unknown 94.8
1861 Female, age 42, unknown 92.4
Supraoptic nucleus
nTPM: 108.8
1894 Female, age 72, unknown 129.6
2835 Female, age 72, unknown 103.2
2043 Male, age 62, unknown 93.7
Ventromedial nucleus
nTPM: 85.4
1982 Female, age 72, unknown 97.7
1822 Female, age 42, unknown 73.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 102.6
Samples: 257

Max nTPM: 254.0
Min nTPM: 52.1
Std nTPM: 28.0
Median nTPM: 97.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 254.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 225.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 192.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 191.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 191.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 184.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 173.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 172.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 168.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 167.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 166.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 165.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 158.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 157.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 156.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 155.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 153.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 152.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 152.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 152.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 148.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 147.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 145.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 142.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 140.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 138.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 137.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 136.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 135.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 133.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 132.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 130.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 128.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 128.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 126.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 126.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 126.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 126.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 125.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 125.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 125.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 125.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 124.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 123.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 119.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 119.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 119.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 118.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 118.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 118.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 118.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 118.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 118.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 117.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 116.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 115.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 115.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 114.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 114.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 114.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 114.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 114.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 113.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 112.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 112.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 109.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 108.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 108.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 108.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 108.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 108.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 107.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 107.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 107.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 107.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 107.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 106.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 106.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 105.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 105.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 105.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 104.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 104.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 104.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 104.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 103.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 103.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 103.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 103.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 103.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 102.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 102.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 102.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 102.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 102.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 102.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 102.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 102.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 101.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 101.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 101.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 101.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 101.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 101.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 101.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 101.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 101.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 101.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 101.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 101.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 100.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 100.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 100.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 100.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 100.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 99.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 99.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 99.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 99.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 99.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 98.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 98.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 98.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 98.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 98.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 97.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 97.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 97.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 97.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 96.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 96.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 96.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 96.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 96.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 95.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 95.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 95.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 94.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 94.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 94.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 94.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 93.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 93.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 93.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 93.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 93.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 92.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 92.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 92.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 92.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 92.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 92.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 92.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 92.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 91.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 91.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 91.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 91.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 90.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 90.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 90.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 89.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 89.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 89.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 89.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 89.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 89.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 89.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 88.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 88.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 88.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 88.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 88.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 88.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 88.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 88.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 87.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 87.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 86.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 86.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 86.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 86.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 86.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 86.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 85.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 85.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 85.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 84.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 84.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 84.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 84.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 84.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 84.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 84.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 83.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 83.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 83.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 83.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 83.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 82.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 82.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 82.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 81.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 81.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 81.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 81.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 81.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 81.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 80.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 80.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 80.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 79.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 79.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 79.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 79.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 79.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 78.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 78.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 78.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 77.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 77.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 77.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 77.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 77.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 77.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 77.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 76.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 76.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 76.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 75.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 75.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 75.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 75.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 74.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 74.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 74.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 73.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 73.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 72.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 71.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 70.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 70.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 70.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 69.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 69.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 69.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 66.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 66.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 65.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 64.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 64.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 63.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 54.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 52.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 95.7
Samples: 4

Max nTPM: 118.9
Min nTPM: 66.4
Sample A Female 118.9
Sample B Female 106.1
Sample C Male 91.2
Sample D Male 66.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 101.9
Samples: 4

Max nTPM: 108.0
Min nTPM: 95.5
Sample A Male 95.5
Sample B Male 106.7
Sample C Female 108.0
Sample D Female 97.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.2
75077193 Antisense, RP_060412_02_E05, Mouse strain C57BL/6J (56 days, male) 11.1
68745353 Antisense, RP_050210_01_G07, Mouse strain C57BL/6J (56 days, male) 5.3

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