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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • BASP1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:74.2 nTPM
GTEx:67.8 nTPM
FANTOM5:457.6 Scaled Tags Per Million
Macaque:54.9 nTPM
Pig:119.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.2
Sample id Sample description nTPM
Putamen
nTPM: 74.2
1937 Female, age 91, right hemisphere 124.4
1838 Male, age 80, right hemisphere 103.4
2466 Female, age 79, unknown 78.9
1829 Male, age 74, unknown 71.8
2482 Female, age 94, left hemisphere 59.5
2647 Male, age 75, left hemisphere 44.1
2489 Female, age 72, unknown 36.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 67.8
Samples: 254

Max nTPM: 284.1
Min nTPM: 11.0
Std nTPM: 39.1
Median nTPM: 62.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 284.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 191.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 165.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 162.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 160.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 156.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 147.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 146.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 141.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 141.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 134.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 134.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 133.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 132.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 132.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 131.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 131.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 130.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 125.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 125.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 124.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 122.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 122.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 120.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 118.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 118.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 118.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 117.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 114.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 113.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 112.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 112.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 112.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 112.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 112.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 109.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 109.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 109.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 108.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 107.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 106.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 105.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 104.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 103.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 103.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 102.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 100.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 99.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 99.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 99.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 98.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 97.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 95.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 95.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 95.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 94.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 94.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 94.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 93.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 93.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 93.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 93.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 93.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 92.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 92.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 91.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 91.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 90.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 89.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 89.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 88.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 88.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 88.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 87.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 87.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 86.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 86.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 85.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 83.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 82.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 82.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 82.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 81.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 81.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 81.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 81.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 80.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 80.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 80.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 80.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 78.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 78.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 78.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 77.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 77.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 76.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 76.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 76.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 75.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 75.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 75.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 75.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 73.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 73.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 73.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 72.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 71.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 71.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 70.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 70.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 70.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 70.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 70.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 69.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 69.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 67.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 67.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 65.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 64.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 64.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 63.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 63.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 63.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 62.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 62.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 61.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 61.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 60.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 60.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 59.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 59.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 58.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 58.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 58.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 58.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 57.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 56.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 56.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 56.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 55.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 55.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 53.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 53.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 52.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 51.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 51.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 51.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 50.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 50.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 50.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 49.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 48.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 48.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 47.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 47.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 47.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 46.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 46.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 46.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 45.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 45.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 44.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 44.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 44.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 43.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 43.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 42.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 42.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 42.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 41.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 41.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 41.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 40.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 40.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 40.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 40.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 39.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 38.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 37.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 36.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 36.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 34.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 34.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 33.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 33.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 32.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 32.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 32.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 31.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 31.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 30.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 29.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 29.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 29.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 29.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 29.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 28.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 28.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 27.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 27.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 26.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 26.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 26.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 26.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 25.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 25.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 25.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 24.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 24.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 24.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 23.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 23.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 22.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 22.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 22.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 21.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 21.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 20.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 19.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 19.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 19.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 19.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 18.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 17.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 17.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 17.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 16.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 15.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 14.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 14.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 13.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 11.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

457.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 457.6
FF:10176-103C5 60 years, female 457.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.9
Macaque sample Sample description nTPM
Putamen
nTPM: 54.9
Samples: 2

Max nTPM: 59.2
Min nTPM: 50.6
Sample A 50.6
Sample B 59.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.7
Pig sample Sample description nTPM
Putamen
nTPM: 119.7
Samples: 3

Max nTPM: 129.4
Min nTPM: 109.6
Sample B Female 109.6
Sample C Male 129.4
Sample D Male 120.1

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