HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:14.8 nTPM
HPA Brain:39.2 nTPM
GTEx:14.8 nTPM
FANTOM5:10.2 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:8.5 nTPM
Allen mouse:3.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071906
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 34.9
2529 Female, age 94, left hemisphere 42.7
1911 Female, age 85, right hemisphere 38.2
1855 Male, age 76, left hemisphere 36.3
2621 Female, age 67, right hemisphere 33.7
2148 Female, age 91, left hemisphere 32.4
1898 Male, age 80, left hemisphere 26.2
Dentate gyrus
nTPM: 32.0
2530 Female, age 94, left hemisphere 41.7
2528 Male, age 74, both hemispheres 33.9
2010 Male, age 76, both hemispheres 31.6
2246 Female, age 85, both hemispheres 30.9
2531 Female, age 67, both hemispheres 28.2
1927 Female, age 91, both hemispheres 25.8
Entorhinal gyrus
nTPM: 34.8
2686 Male, age 75, right hemisphere 40.7
2117 Female, age 91, right hemisphere 39.8
2613 Female, age 94, left hemisphere 36.7
2764 Male, age 80, right hemisphere 34.1
1787 Male, age 76, left hemisphere 32.4
1938 Female, age 85, left hemisphere 25.3
Hippocampus, CA1
nTPM: 29.3
2527 Male, age 74, both hemispheres 37.4
2082 Female, age 91, right hemisphere 31.0
1873 Female, age 85, both hemispheres 28.1
2045 Male, age 76, both hemispheres 26.3
2749 Male, age 80, left hemisphere 23.8
Hippocampus, CA2
nTPM: 33.2
2437 Female, age 94, left hemisphere 42.6
2249 Male, age 74, both hemispheres 35.5
2113 Female, age 91, right hemisphere 34.2
1963 Male, age 80, left hemisphere 33.6
1940 Female, age 85, left hemisphere 28.2
1892 Male, age 76, both hemispheres 24.9
Hippocampus, CA3
nTPM: 32.3
2861 Female, age 67, both hemispheres 42.8
1891 Female, age 85, both hemispheres 32.8
1867 Male, age 76, both hemispheres 30.4
2137 Male, age 80, left hemisphere 29.9
2620 Female, age 94, left hemisphere 29.3
2436 Male, age 74, both hemispheres 28.7
Parahippocampal cortex
nTPM: 31.3
2692 Male, age 74, both hemispheres 40.9
2622 Female, age 67, right hemisphere 37.3
2018 Male, age 76, both hemispheres 36.4
2245 Female, age 91, both hemispheres 31.8
2532 Female, age 72, left hemisphere 31.0
1990 Female, age 91, right hemisphere 30.2
2250 Female, age 67, right hemisphere 28.0
2693 Female, age 94, both hemispheres 26.7
1933 Female, age 85, both hemispheres 26.2
1850 Male, age 80, both hemispheres 24.7
Perirhinal gyrus
nTPM: 23.4
2848 Male, age 76, right hemisphere 25.9
1847 Female, age 91, left hemisphere 23.7
1794 Male, age 80, right hemisphere 23.5
1841 Female, age 85, right hemisphere 22.9
2521 Female, age 94, right hemisphere 20.9
Subiculum
nTPM: 39.2
2438 Female, age 94, left hemisphere 44.1
2619 Male, age 74, both hemispheres 43.0
2042 Male, age 76, both hemispheres 41.9
2729 Female, age 91, right hemisphere 37.2
1901 Male, age 80, both hemispheres 36.6
1977 Female, age 85, both hemispheres 32.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 255

Max nTPM: 35.9
Min nTPM: 3.6
Std nTPM: 4.7
Median nTPM: 13.9
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 35.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 30.1
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 28.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 27.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.8
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 26.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 25.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 24.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 23.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 23.6
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 23.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.2
FF:10153-102I9 76 years, female 14.2
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 16.5
Pig sample Sample description nTPM
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.2
Sample A Female 21.3
Sample B Female 16.7
Sample C Male 15.0
Sample D Male 13.2
Dorsal hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 19.2
Min nTPM: 9.9
Sample A Female 17.8
Sample B Female 14.8
Sample C Male 19.2
Sample D Male 9.9
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.5
Sample A Female 14.4
Sample B Female 13.1
Sample C Male 15.9
Sample D Male 11.5
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.2
Sample A Female 14.9
Sample B Female 14.2
Sample C Male 21.6
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.0
Sample A Male 9.3
Sample B Male 8.4
Sample C Female 8.0
Sample D Female 8.5
Hippocampal formation
nTPM: 7.7
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.5
Sample A Male 6.6
Sample B Male 8.5
Sample C Female 6.5
Sample D Female 9.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
68744444 Antisense, RP_050203_02_H09, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo