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BETA
  • SUMMARY

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  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • ATOX1
EVOLUTIONARY KIDNEY Show tissue menu
BRAIN66 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM10 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Kidney & Urinary bladder
Evolutionary methods
KIDNEY - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:226.6 nTPM
HPA:131.4 nTPM
GTEx:226.6 nTPM
FANTOM5:69.8 Scaled Tags Per Million
KIDNEY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

KIDNEY - Annotated protein expression
Pending normal tissue analysis

KIDNEY - PROTEINTALKS DB MS
Median intensity 7121
Sample Intensity
Kidney_01
3435
Kidney_02
14960
Kidney_03
8898
Kidney_04
5344
Kidney_05
12770
Kidney_06
2020

KIDNEY - MANN MS
Median intensity 142989448
Replicate Intensity
Kidney_01
159534571
Kidney_02
126195006
Kidney_03
142989448

KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.4
overview
Female, age 58
Kidney sample 55
nTPM: 123.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 132.1
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 68.4
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 137
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 99.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 100.8
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 346.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 91.5
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 82.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

226.6
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 226.6
Samples: 104

Max nTPM: 698.2
Min nTPM: 76.3
Std nTPM: 105.7
Median nTPM: 204.9
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 698.2
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 569.3
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 548.0
GTEX-WL46-1926-SM-GNIN6 50-59 years, male 461.0
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 450.9
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 435.8
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 398.0
GTEX-1117F-2126-SM-GIN9G 60-69 years, female 396.0
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 378.4
GTEX-1O9I2-1926-SM-F2TBQ 50-59 years, male 370.7
GTEX-1RQEC-2426-SM-F2I1J 60-69 years, male 368.2
GTEX-15DCD-1926-SM-HAV33 70-79 years, female 345.5
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 341.0
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 323.0
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 315.4
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 311.6
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 307.6
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 301.1
GTEX-O5YV-1226-SM-EV795 60-69 years, female 298.2
GTEX-14JG1-2326-SM-HAUZ5 40-49 years, male 289.3
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 286.6
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 284.1
GTEX-QDVN-1726-SM-HL9TO 50-59 years, male 283.4
GTEX-1HCVE-2126-SM-HL9UO 50-59 years, male 281.3
GTEX-1ICLY-2026-SM-GA913 50-59 years, male 279.5
GTEX-1JJE9-1026-SM-HL9TH 70-79 years, male 273.8
GTEX-13FHP-2126-SM-GIN8J 50-59 years, male 273.0
GTEX-16Z82-2826-SM-HAUZZ 60-69 years, male 269.3
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 264.9
GTEX-14PJ2-1826-SM-HL9UB 50-59 years, male 264.8
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 264.0
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 259.8
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 247.9
GTEX-16XZZ-2226-SM-HAV34 60-69 years, male 247.2
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 245.5
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 236.2
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 235.5
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 234.1
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 230.4
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 226.4
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 225.5
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 224.7
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 217.6
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 217.2
GTEX-NFK9-1826-SM-HL9T3 40-49 years, male 215.4
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 213.6
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 213.5
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 213.2
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 209.9
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 209.0
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 208.0
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 206.7
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 203.1
GTEX-1QAET-2126-SM-F2TBS 50-59 years, male 201.5
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 197.0
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 196.8
GTEX-14C39-2126-SM-664OH 40-49 years, male 196.5
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 196.3
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 196.0
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 190.7
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 189.3
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 186.9
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 183.7
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 178.1
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 176.4
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 174.2
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 174.0
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 172.7
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 172.7
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 172.5
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 172.2
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 167.2
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 162.5
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 161.6
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 161.5
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 161.0
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 159.0
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 158.5
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 157.4
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 151.9
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 151.8
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 150.4
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 149.9
GTEX-ZXG5-2026-SM-HAUZV 60-69 years, male 146.7
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 144.7
GTEX-13O3O-1726-SM-GJ3RL 60-69 years, female 141.4
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 136.4
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 128.2
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 127.9
GTEX-13112-2126-SM-5GCO4 50-59 years, male 126.0
GTEX-1LH75-1326-SM-F2I1R 50-59 years, female 124.5
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 122.9
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 119.6
GTEX-16XZY-1026-SM-HAV39 70-79 years, male 118.9
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 117.3
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 114.0
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 113.7
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 112.8
GTEX-12696-0926-SM-5FQTV 60-69 years, male 107.9
GTEX-W5X1-1626-SM-H7OGO 40-49 years, female 107.7
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 101.6
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 97.1
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 90.2
GTEX-RN64-1626-SM-48FD7 50-59 years, male 76.3
Show allShow less
Kidney - Medulla
Average nTPM: 225.0
Samples: 11

Max nTPM: 932.5
Min nTPM: 111.0
Std nTPM: 227.6
Median nTPM: 148.4
GTEX-N7MS-1526-SM-HAUZP 60-69 years, male 932.5
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 259.0
GTEX-P4QS-1226-SM-HPAG8 60-69 years, male 209.7
GTEX-SIU8-1926-SM-H7OG4 50-59 years, male 158.9
GTEX-QEG5-2026-SM-H6Q6I 20-29 years, male 150.9
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 148.4
GTEX-QEG4-1526-SM-GPRWK 30-39 years, male 143.8
GTEX-T6MN-1926-SM-GOQYD 50-59 years, male 123.3
GTEX-S33H-1526-SM-GQ1CB 30-39 years, male 123.2
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 114.9
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 111.0
Show allShow less

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

69.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 69.8
FF:10017-101C8 60,62,63 years, female 69.8

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