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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • RPLP2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:453.9 nTPM
GTEx:1201.7 nTPM
FANTOM5:696.8 Scaled Tags Per Million
Macaque:192.6 nTPM
Pig:59.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

453.9
Sample id Sample description nTPM
Putamen
nTPM: 453.9
2466 Female, age 79, unknown 509.6
2482 Female, age 94, left hemisphere 506.9
1937 Female, age 91, right hemisphere 457.3
1829 Male, age 74, unknown 452.1
2647 Male, age 75, left hemisphere 445.0
2489 Female, age 72, unknown 415.2
1838 Male, age 80, right hemisphere 391.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1201.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1201.7
Samples: 254

Max nTPM: 2672.8
Min nTPM: 513.6
Std nTPM: 336.5
Median nTPM: 1134.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2672.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2542.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2456.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2187.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2052.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1972.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1965.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1912.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1907.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1890.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1865.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1861.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1850.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1843.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1835.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1808.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1741.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1737.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1727.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1711.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1702.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1693.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1692.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1671.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1656.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1643.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1622.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1617.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1614.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1610.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1605.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1603.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1597.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1596.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1593.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1588.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1586.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1546.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1545.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1525.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1524.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1504.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1468.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1465.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1459.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1453.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1449.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1444.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1438.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1436.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1431.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1430.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1426.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1424.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1423.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1419.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1413.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1405.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1392.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1389.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1386.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1382.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1370.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1362.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1358.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1351.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1346.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1344.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1338.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1338.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1327.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1325.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1322.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1321.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1310.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1305.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1301.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1295.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1294.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1293.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1285.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1282.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1277.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1276.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1276.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1276.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1276.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1275.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1264.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1262.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1260.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1256.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1256.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1255.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1255.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1248.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1247.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1240.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1239.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1232.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1231.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1224.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1218.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1218.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1215.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1212.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1207.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1203.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1202.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1200.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1189.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1188.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1183.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1167.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1165.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1163.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1163.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1162.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1156.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1153.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1147.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1141.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1140.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1139.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1139.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1136.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1134.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1134.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1129.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1126.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1126.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1125.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1124.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1121.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1117.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1115.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1114.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1103.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1102.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1102.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1101.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1101.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1099.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1096.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1096.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1093.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1087.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1086.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1086.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1085.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1080.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1080.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1075.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1074.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1072.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1071.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1070.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1066.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1065.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1060.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1058.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1050.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1048.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1047.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1040.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1037.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1036.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1033.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1027.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1026.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1026.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1024.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1022.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1021.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1021.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1018.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1012.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1011.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1009.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1004.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1001.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1001.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 999.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 996.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 995.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 993.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 991.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 990.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 984.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 984.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 984.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 983.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 966.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 963.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 962.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 960.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 959.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 953.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 952.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 946.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 946.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 945.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 945.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 942.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 941.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 931.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 916.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 915.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 912.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 909.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 899.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 895.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 893.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 891.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 888.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 886.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 885.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 879.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 874.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 874.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 869.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 867.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 864.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 859.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 856.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 856.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 854.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 853.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 840.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 838.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 836.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 830.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 830.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 823.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 814.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 808.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 801.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 797.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 790.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 788.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 779.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 749.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 744.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 735.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 731.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 715.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 714.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 692.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 672.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 664.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 662.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 643.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 624.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 513.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

696.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 696.8
FF:10176-103C5 60 years, female 696.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

192.6
Macaque sample Sample description nTPM
Putamen
nTPM: 192.6
Samples: 2

Max nTPM: 205.7
Min nTPM: 179.5
Sample A 179.5
Sample B 205.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.3
Pig sample Sample description nTPM
Putamen
nTPM: 59.3
Samples: 3

Max nTPM: 71.6
Min nTPM: 46.3
Sample B Female 46.3
Sample C Male 71.6
Sample D Male 59.9

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