HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:2582.5 nTPM
HPA Brain:313.2 nTPM
GTEx:2582.5 nTPM
FANTOM5:296.3 Scaled Tags Per Million
Pig:25.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 313.2
Sample id Sample description nTPM
Hippocampus
nTPM: 313.2
2529 Female, age 94, left hemisphere 425.8
2621 Female, age 67, right hemisphere 342.1
1911 Female, age 85, right hemisphere 292.6
1898 Male, age 80, left hemisphere 283.7
2148 Female, age 91, left hemisphere 279.1
1855 Male, age 76, left hemisphere 255.8
Dentate gyrus
nTPM: 282.2
2530 Female, age 94, left hemisphere 406.8
2246 Female, age 85, both hemispheres 335.5
2531 Female, age 67, both hemispheres 317.6
2010 Male, age 76, both hemispheres 274.2
1927 Female, age 91, both hemispheres 188.5
2528 Male, age 74, both hemispheres 170.8
Entorhinal gyrus
nTPM: 274.0
2686 Male, age 75, right hemisphere 375.5
2117 Female, age 91, right hemisphere 307.3
1787 Male, age 76, left hemisphere 290.4
1938 Female, age 85, left hemisphere 241.2
2764 Male, age 80, right hemisphere 228.5
2613 Female, age 94, left hemisphere 200.9
Hippocampus, CA1
nTPM: 231.0
2527 Male, age 74, both hemispheres 285.2
2045 Male, age 76, both hemispheres 261.8
1873 Female, age 85, both hemispheres 230.1
2082 Female, age 91, right hemisphere 192.8
2749 Male, age 80, left hemisphere 185.0
Hippocampus, CA2
nTPM: 242.1
2437 Female, age 94, left hemisphere 355.7
1892 Male, age 76, both hemispheres 270.3
1940 Female, age 85, left hemisphere 269.5
2113 Female, age 91, right hemisphere 223.2
2249 Male, age 74, both hemispheres 179.0
1963 Male, age 80, left hemisphere 154.9
Hippocampus, CA3
nTPM: 240.6
1891 Female, age 85, both hemispheres 317.3
2861 Female, age 67, both hemispheres 314.5
1867 Male, age 76, both hemispheres 272.0
2436 Male, age 74, both hemispheres 200.1
2620 Female, age 94, left hemisphere 175.8
2137 Male, age 80, left hemisphere 164.1
Parahippocampal cortex
nTPM: 254.2
2018 Male, age 76, both hemispheres 324.4
2245 Female, age 91, both hemispheres 322.2
2532 Female, age 72, left hemisphere 291.4
2692 Male, age 74, both hemispheres 267.0
1850 Male, age 80, both hemispheres 259.7
1990 Female, age 91, right hemisphere 232.0
2622 Female, age 67, right hemisphere 230.1
2250 Female, age 67, right hemisphere 228.7
1933 Female, age 85, both hemispheres 221.5
2693 Female, age 94, both hemispheres 164.9
Perirhinal gyrus
nTPM: 237.3
2848 Male, age 76, right hemisphere 265.4
1841 Female, age 85, right hemisphere 245.7
1794 Male, age 80, right hemisphere 240.7
2521 Female, age 94, right hemisphere 223.1
1847 Female, age 91, left hemisphere 211.5
Subiculum
nTPM: 307.1
2438 Female, age 94, left hemisphere 431.0
2042 Male, age 76, both hemispheres 380.8
1901 Male, age 80, both hemispheres 304.7
1977 Female, age 85, both hemispheres 290.6
2619 Male, age 74, both hemispheres 254.8
2729 Female, age 91, right hemisphere 180.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2582.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2582.5
Samples: 255

Max nTPM: 7658.0
Min nTPM: 736.3
Std nTPM: 1114.6
Median nTPM: 2341.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 7658.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 6701.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 6288.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 5813.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 5724.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 5583.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 5498.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 5474.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 5407.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 5332.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 5041.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 296.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 296.3
FF:10169-103B7 60 years, female 331.3
FF:10153-102I9 76 years, female 261.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.2
Samples: 4

Max nTPM: 33.6
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 22.6
Sample C Male 22.4
Sample D Male 33.6
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 21.0
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 13.5
Sample C Male 9.6
Sample D Male 21.0
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 18.5
Sample A Female 24.7
Sample B Female 21.6
Sample C Male 18.5
Sample D Male 36.1
Ventral hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 46.8
Min nTPM: 7.7
Sample A Female 34.2
Sample B Female 46.8
Sample C Male 10.8
Sample D Male 7.7

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