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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:28.7 nTPM
HPA Brain:51.0 nTPM
GTEx:28.7 nTPM
Pig:23.6 nTPM
Mouse:27.9 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 36.6
1961 Female, age 42, unknown 37.6
2226 Male, age 75, left hemisphere 35.7
Dorsomedial nucleus
nTPM: 51.0
1989 Male, age 62, unknown 66.5
2041 Female, age 72, unknown 44.0
2017 Female, age 42, unknown 42.5
Lateral hypothalamic area
nTPM: 43.4
2412 Male, age 62, unknown 47.3
1791 Male, age 80, right hemisphere 44.2
2228 Male, age 66, unknown 43.6
2271 Male, age 75, both hemispheres 38.5
Mammillary body
nTPM: 36.9
1945 Male, age 80, right hemisphere 42.6
2413 Male, age 66, unknown 40.2
1923 Female, age 72, unknown 37.9
1948 Female, age 72, unknown 34.1
1834 Female, age 42, unknown 29.8
Paraventricular nucleus
nTPM: 36.5
2700 Male, age 62, unknown 36.5
Preoptic area
nTPM: 46.7
1907 Male, age 80, right hemisphere 52.9
1861 Female, age 42, unknown 46.8
2414 Female, age 72, unknown 40.4
Supraoptic nucleus
nTPM: 36.3
2043 Male, age 62, unknown 38.9
1894 Female, age 72, unknown 35.2
2835 Female, age 72, unknown 34.8
Ventromedial nucleus
nTPM: 34.7
1822 Female, age 42, unknown 35.2
1982 Female, age 72, unknown 34.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 28.7
Samples: 257

Max nTPM: 45.6
Min nTPM: 12.8
Std nTPM: 5.8
Median nTPM: 29.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 45.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 44.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 44.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 43.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 42.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 42.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 41.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 40.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 38.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 38.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 38.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 38.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 37.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 37.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 37.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 37.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 37.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 37.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 36.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 36.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 36.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 35.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 35.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 35.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 35.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 35.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 35.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 35.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 35.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 35.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 34.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 34.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 34.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 34.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 34.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 34.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 34.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 34.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 34.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 34.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 33.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 33.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 33.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 33.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 33.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 33.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 33.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 33.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 33.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 33.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 32.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 32.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 32.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 32.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 32.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 32.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 32.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 32.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 32.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 32.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 32.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 32.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 32.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 32.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 32.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 32.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 31.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 31.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 31.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 31.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 31.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 31.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 31.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 31.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 31.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 31.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 31.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 31.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 31.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 30.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 30.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 30.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 30.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 30.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 30.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 30.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 30.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 30.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 30.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 30.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 30.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 30.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 30.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 30.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 30.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 30.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 30.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 30.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 30.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 30.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 30.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 30.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 29.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 29.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 29.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 29.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 29.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 29.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 29.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 29.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 29.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 29.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 29.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 29.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 29.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 29.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 29.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 29.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 29.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 28.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 28.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 28.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 28.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 28.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 28.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 28.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 28.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 28.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 28.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 28.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 28.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 28.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 28.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 28.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 28.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 28.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 27.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 27.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 27.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 27.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 27.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 27.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 27.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 27.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 27.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 27.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 27.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 26.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 26.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 26.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 26.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 26.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 26.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 26.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 26.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 26.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 26.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 26.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 26.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 26.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 26.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 26.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 26.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 26.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 26.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 26.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 26.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 26.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 26.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 26.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 25.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 25.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 25.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 25.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 25.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 25.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 25.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 25.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 25.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 25.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 25.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 25.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 25.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 25.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 24.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 24.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 24.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 24.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 24.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 24.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 24.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 24.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 24.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 24.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 24.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 24.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 23.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 23.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 23.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 23.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 23.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 23.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 23.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 22.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 22.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 22.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 22.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 22.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 22.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 21.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 21.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 21.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 21.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 21.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 21.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 20.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 20.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 20.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 20.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 20.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 20.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 20.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 19.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 19.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 19.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 19.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 19.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 19.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 19.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 18.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 18.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 17.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 17.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 17.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 17.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 16.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 16.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 13.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 13.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 12.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 23.6
Samples: 4

Max nTPM: 28.2
Min nTPM: 19.1
Sample A Female 28.2
Sample B Female 24.3
Sample C Male 22.6
Sample D Male 19.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 27.9
Samples: 4

Max nTPM: 29.5
Min nTPM: 25.3
Sample A Male 25.3
Sample B Male 29.5
Sample C Female 28.9
Sample D Female 27.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
75750475 Antisense, RP_060518_04_H05, Mouse strain C57BL/6J (56 days, male) 0.9
70805935 Antisense, RP_050725_02_E05, Mouse strain C57BL/6J (56 days, male) 0.3

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