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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:140.3 nTPM
HPA Brain:314.3 nTPM
GTEx:140.3 nTPM
Pig:317.0 nTPM
Mouse:293.6 nTPM
Allen mouse:22.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

314.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 238.9
2226 Male, age 75, left hemisphere 273.6
1961 Female, age 42, unknown 204.1
Dorsomedial nucleus
nTPM: 208.9
1989 Male, age 62, unknown 233.5
2041 Female, age 72, unknown 205.8
2017 Female, age 42, unknown 187.5
Lateral hypothalamic area
nTPM: 314.3
2228 Male, age 66, unknown 369.8
2271 Male, age 75, both hemispheres 368.9
1791 Male, age 80, right hemisphere 335.1
2412 Male, age 62, unknown 183.3
Mammillary body
nTPM: 261.8
1923 Female, age 72, unknown 303.6
1834 Female, age 42, unknown 272.2
1945 Male, age 80, right hemisphere 257.5
2413 Male, age 66, unknown 253.2
1948 Female, age 72, unknown 222.7
Paraventricular nucleus
nTPM: 199.3
2700 Male, age 62, unknown 199.3
Preoptic area
nTPM: 221.6
1907 Male, age 80, right hemisphere 239.3
2414 Female, age 72, unknown 218.9
1861 Female, age 42, unknown 206.6
Supraoptic nucleus
nTPM: 308.4
1894 Female, age 72, unknown 325.0
2043 Male, age 62, unknown 300.4
2835 Female, age 72, unknown 299.8
Ventromedial nucleus
nTPM: 220.3
1982 Female, age 72, unknown 239.2
1822 Female, age 42, unknown 201.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 140.3
Samples: 257

Max nTPM: 411.9
Min nTPM: 58.5
Std nTPM: 49.3
Median nTPM: 129.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 411.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 376.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 361.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 353.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 336.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 322.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 321.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 256.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 253.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 239.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 232.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 229.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 228.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 228.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 226.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 223.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 209.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 203.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 200.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 198.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 197.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 192.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 187.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 187.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 183.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 182.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 181.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 180.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 178.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 178.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 177.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 177.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 175.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 173.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 173.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 173.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 172.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 172.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 171.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 171.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 170.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 170.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 170.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 168.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 168.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 168.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 167.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 167.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 167.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 166.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 165.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 165.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 164.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 162.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 162.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 162.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 161.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 161.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 161.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 160.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 158.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 158.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 157.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 155.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 155.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 155.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 154.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 153.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 153.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 152.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 152.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 152.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 151.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 151.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 151.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 151.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 151.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 151.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 150.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 149.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 149.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 149.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 149.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 149.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 149.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 148.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 147.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 147.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 145.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 143.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 142.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 141.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 141.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 141.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 141.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 140.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 140.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 140.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 139.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 138.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 137.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 137.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 137.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 137.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 136.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 136.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 136.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 135.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 135.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 135.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 134.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 134.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 134.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 133.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 133.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 133.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 132.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 132.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 132.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 132.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 131.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 131.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 131.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 130.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 130.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 129.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 129.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 129.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 129.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 128.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 127.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 127.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 127.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 127.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 126.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 126.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 126.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 125.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 125.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 125.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 124.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 124.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 124.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 123.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 123.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 123.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 122.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 122.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 122.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 122.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 122.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 122.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 122.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 121.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 121.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 121.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 121.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 120.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 120.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 120.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 120.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 120.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 120.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 118.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 118.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 118.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 117.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 117.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 117.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 117.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 116.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 116.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 115.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 115.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 115.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 114.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 114.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 114.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 114.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 114.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 113.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 113.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 113.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 113.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 113.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 113.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 113.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 112.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 112.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 112.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 112.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 112.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 112.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 112.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 111.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 110.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 110.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 110.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 110.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 109.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 109.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 108.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 108.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 108.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 106.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 106.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 106.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 106.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 106.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 106.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 105.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 105.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 104.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 104.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 103.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 101.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 101.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 100.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 100.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 100.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 100.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 100.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 99.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 99.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 99.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 99.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 98.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 98.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 98.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 98.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 97.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 96.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 96.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 96.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 96.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 96.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 95.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 95.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 95.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 94.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 94.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 93.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 93.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 93.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 92.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 91.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 91.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 90.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 88.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 88.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 87.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 84.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 82.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 82.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 77.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 58.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

317.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 317.0
Samples: 4

Max nTPM: 376.7
Min nTPM: 256.9
Sample A Female 376.7
Sample B Female 301.1
Sample C Male 333.3
Sample D Male 256.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

293.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 293.6
Samples: 4

Max nTPM: 310.2
Min nTPM: 258.6
Sample A Male 258.6
Sample B Male 301.3
Sample C Female 310.2
Sample D Female 304.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 22.7
67978478 Antisense, RP_040923_01_C03, Mouse strain C57BL/6J (56 days, male) 22.7

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