PIPOX
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PIPOX
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:473.5 nTPM
HPA:473.5 nTPM
GTEx:297.7 nTPM
FANTOM5:414.4 Scaled Tags Per Million
Macaque:236.5 nTPM
Pig:28.3 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Annotated protein expression
Pending normal tissue analysis

LIVER - PROTEINTALKS DB MS
Median intensity 99116
Sample Intensity
Liver_01
86566
Liver_02
110621
Liver_03
84157
Liver_04
95644
Liver_05
102588
Liver_06
86226
Liver_07
193998
Liver_08
176078
Liver_09
152396
Liver_10
92678

LIVER - MANN MS
Median intensity 66560047
Replicate Intensity
Liver_01
64662229
Liver_02
67615400
Liver_03
66560047

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

473.5
N/A
Female, age 60
Liver sample 21
nTPM: 431.8
overview
Male, age 54
Liver sample 23
nTPM: 366.1
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 496.6
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 469.9
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 459.4
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 485.1
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 394
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 505.6
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 535.6
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 591.1
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.7
GTEx sample id Sample description nTPM
Liver
Average nTPM: 297.7
Samples: 262

Max nTPM: 709.9
Min nTPM: 9.6
Std nTPM: 138.4
Median nTPM: 318.3
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 709.9
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 620.3
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 614.8
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 585.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 533.6
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 532.4
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 531.4
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 525.2
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 519.5
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 509.8
GTEX-14JG1-1626-SM-664NH 40-49 years, male 508.4
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 507.4
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 502.6
GTEX-14PHX-0526-SM-664NW 50-59 years, male 499.0
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 498.8
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 498.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 497.4
GTEX-17HHE-0126-SM-79398 50-59 years, male 492.9
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 490.1
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 484.1
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 477.5
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 476.1
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 473.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 469.2
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 467.0
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 461.1
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 452.4
GTEX-14E7W-1526-SM-6871X 70-79 years, male 452.1
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 450.7
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 450.6
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 450.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 449.6
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 448.6
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 447.5
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 447.2
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 446.4
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 444.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 439.5
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 434.3
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 430.7
GTEX-11ZUS-2526-SM-59872 30-39 years, male 427.9
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 427.0
GTEX-18A7A-1526-SM-72D69 50-59 years, female 426.6
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 426.0
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 424.8
GTEX-111FC-1226-SM-HAV27 60-69 years, male 424.4
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 422.6
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 421.7
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 420.8
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 420.6
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 417.7
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 416.5
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 413.5
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 408.2
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 406.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 405.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 402.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 402.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 401.6
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 400.5
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 399.9
GTEX-13112-1426-SM-5EGH8 50-59 years, male 399.6
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 399.4
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 397.1
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 396.6
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 395.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 395.1
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 393.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 393.0
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 392.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 389.5
GTEX-QESD-2026-SM-447BI 20-29 years, male 387.5
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 387.3
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 384.2
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 383.1
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 382.1
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 381.6
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 380.9
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 378.8
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 377.8
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 374.9
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 374.2
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 372.6
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 372.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 372.0
GTEX-1399T-0826-SM-5IFES 60-69 years, male 371.6
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 369.3
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 368.8
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 368.4
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 368.1
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 366.0
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 365.2
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 365.0
GTEX-17F96-1226-SM-79OK2 70-79 years, male 363.3
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 361.6
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 361.5
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 359.6
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 359.6
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 357.8
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 357.8
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 357.0
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 356.4
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 356.4
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 355.2
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 354.9
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 353.5
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 353.4
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 350.9
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 350.4
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 349.3
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 348.8
GTEX-P78B-1326-SM-3P611 40-49 years, female 345.5
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 342.1
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 338.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 337.2
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 337.1
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 336.3
GTEX-18465-1626-SM-7LG6N 50-59 years, male 335.9
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 335.4
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 333.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 333.5
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 332.4
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 329.4
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 328.9
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 326.6
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 325.3
GTEX-YECK-1926-SM-4W21H 60-69 years, male 323.4
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 322.7
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 322.7
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 319.9
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 318.6
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 318.0
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 315.0
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 313.6
GTEX-18A66-2026-SM-7189C 60-69 years, male 311.4
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 307.3
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 306.1
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 305.9
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 304.4
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 304.0
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 300.6
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 298.5
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 295.2
GTEX-1B933-1226-SM-731DW 50-59 years, female 294.7
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 294.2
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 292.5
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 291.7
GTEX-11GSP-0626-SM-5986T 60-69 years, female 287.4
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 286.4
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 285.6
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 284.6
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 284.3
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 281.3
GTEX-13113-1326-SM-5GCOI 60-69 years, female 280.3
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 280.2
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 280.0
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 278.8
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 278.4
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 277.4
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 276.7
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 276.0
GTEX-X261-1726-SM-4PQYT 50-59 years, male 275.4
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 270.1
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 269.9
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 268.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 266.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 265.1
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 263.3
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 262.7
GTEX-RU72-1426-SM-46MUF 50-59 years, female 261.0
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 260.2
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 259.2
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 256.6
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 255.1
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 254.2
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 250.6
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 248.1
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 246.9
GTEX-Q734-0326-SM-48U15 40-49 years, female 246.9
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 244.7
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 242.9
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 240.1
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 240.0
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 240.0
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 237.3
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 236.9
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 235.9
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 234.5
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 233.4
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 224.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 216.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 213.1
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 209.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 205.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 204.4
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 202.3
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 199.9
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 194.7
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 193.8
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 192.6
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 190.7
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 187.9
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 187.0
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 184.7
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 175.2
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 173.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 169.0
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 168.0
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 162.9
GTEX-REY6-1226-SM-48FDR 60-69 years, male 161.3
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 158.4
GTEX-QEL4-1226-SM-447A4 50-59 years, male 155.6
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 152.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 147.1
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 146.6
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 146.6
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 144.9
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 144.4
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 140.9
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 140.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 135.6
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 134.3
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 132.8
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 129.5
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 129.3
GTEX-1B932-1426-SM-793AN 40-49 years, female 126.8
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 124.3
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 120.3
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 112.9
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 106.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 100.4
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 97.8
GTEX-S33H-1626-SM-4AD68 30-39 years, male 95.1
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 83.8
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 81.8
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 76.2
GTEX-14PJO-1726-SM-68719 60-69 years, male 74.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 72.9
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 69.8
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 69.6
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 69.4
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 66.9
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 66.4
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 66.1
GTEX-S32W-1926-SM-4AD63 50-59 years, female 58.4
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 55.6
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 48.3
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 45.9
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 43.8
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 40.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 40.6
GTEX-14XAO-0226-SM-68728 60-69 years, female 38.8
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 38.2
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 36.2
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 35.9
GTEX-O5YV-0726-SM-EV798 60-69 years, female 34.5
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 32.2
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 21.9
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 18.0
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 15.3
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 15.2
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 9.6
Show allShow less

LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

414.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 414.4
FF:10018-101C9 64,69,70 years, mixed 414.4

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.5
Macaque sample Sample description nTPM
Liver
nTPM: 236.6
Samples: 3

Max nTPM: 263.7
Min nTPM: 210.0
Sample B 263.7
Sample C 210.0
Sample D 236.0

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.3
Pig sample Sample description nTPM
Liver
nTPM: 28.3
Samples: 4

Max nTPM: 42.8
Min nTPM: 12.2
Sample A Female 28.4
Sample B Female 42.8
Sample C Male 12.2
Sample D Male 29.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.