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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
160.4
Sample id
Sample description
nTPM
Amygdala nTPM: 160.4
2695
Female, age 67, right hemisphere
186.9
2514
Male, age 75, right hemisphere
174.7
1987
Female, age 91, left hemisphere
154.6
2814
Male, age 76, right hemisphere
147.5
2517
Female, age 94, left hemisphere
138.5
Basal amygdala nTPM: 125.5
2609
Male, age 75, right hemisphere
139.1
2827
Female, age 67, right hemisphere
136.3
2685
Female, age 94, left hemisphere
133.2
2110
Male, age 80, left hemisphere
126.4
1955
Male, age 76, both hemispheres
120.6
2243
Female, age 91, right hemisphere
97.5
Central amygdala nTPM: 132.8
2826
Female, age 94, left hemisphere
192.7
2515
Male, age 75, right hemisphere
139.8
1905
Male, age 76, both hemispheres
128.4
2239
Male, age 80, left hemisphere
110.7
2701
Female, age 91, right hemisphere
92.2
Corticomedial amygdala nTPM: 118.9
2829
Male, age 80, left hemisphere
134.3
2429
Female, age 94, left hemisphere
130.9
2428
Male, age 75, right hemisphere
125.0
2242
Female, age 91, right hemisphere
119.7
2240
Male, age 76, both hemispheres
102.7
2535
Female, age 67, right hemisphere
100.5
Lateral amygdala nTPM: 132.7
2516
Male, age 75, right hemisphere
177.3
2830
Female, age 67, right hemisphere
161.1
2534
Female, age 94, left hemisphere
157.0
1883
Male, age 76, both hemispheres
121.8
2256
Male, age 80, left hemisphere
93.0
2255
Female, age 91, right hemisphere
85.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
700.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 700.9
Samples: 181
Max nTPM: 2238.7
Min nTPM: 323.3
Std nTPM: 266.9
Median nTPM: 632.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
2238.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
2109.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1811.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1742.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1605.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1533.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1435.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1164.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1133.0
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
1090.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1002.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
977.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
955.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
951.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
934.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
927.0
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
921.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
921.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
918.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
903.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
894.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
857.6
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
849.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
848.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
842.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
840.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
839.6
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
835.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
822.1
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
818.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
817.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
814.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
811.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
803.1
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
798.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
797.6
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
790.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
789.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
783.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
781.9
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
776.8
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
775.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
774.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
769.5
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
765.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
763.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
762.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
759.9
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
755.0
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
753.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
750.8
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
749.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
748.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
746.8
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
744.7
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
743.7
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
733.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
733.3
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
729.4
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
729.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
727.1
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
726.8
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
724.2
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
722.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
721.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
721.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
717.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
716.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
706.7
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
705.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
703.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
701.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
698.8
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
698.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
691.0
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
688.9
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
686.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
679.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
678.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
676.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
672.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
671.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
666.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
659.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
658.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
657.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
657.3
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
654.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
641.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
636.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
632.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
630.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
630.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
630.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
628.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
628.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
625.4
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
625.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
619.3
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
614.1
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
613.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
611.4
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
611.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
609.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
609.2
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
608.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
606.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
602.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
602.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
601.9
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
601.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
600.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
597.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
596.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
594.6
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
592.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
591.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
590.9
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
590.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
586.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
585.0
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
585.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
584.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
583.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
579.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
577.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
574.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
573.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
570.3
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
567.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
567.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
565.7
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
564.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
562.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
561.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
557.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
552.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
550.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
549.5
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
548.5
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
547.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
540.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
533.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
530.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
529.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
528.8
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
528.5
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
527.9
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
524.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
520.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
516.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
512.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
511.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
508.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
504.2
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
500.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
498.9
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
497.2
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
493.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
492.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
492.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
489.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
482.4
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
480.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
479.8
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
479.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
472.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
468.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
467.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
465.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
462.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
461.2
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
457.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
442.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
438.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
436.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
428.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
409.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
399.1
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
396.5
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
323.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.