HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:536.7 nTPM
HPA Brain:136.1 nTPM
GTEx:536.7 nTPM
FANTOM5:128.6 Scaled Tags Per Million
Pig:252.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 136.1
Sample id Sample description nTPM
Hippocampus
nTPM: 136.1
1898 Male, age 80, left hemisphere 166.6
2529 Female, age 94, left hemisphere 143.4
2621 Female, age 67, right hemisphere 140.3
1911 Female, age 85, right hemisphere 130.3
1855 Male, age 76, left hemisphere 119.5
2148 Female, age 91, left hemisphere 116.7
Dentate gyrus
nTPM: 123.5
2530 Female, age 94, left hemisphere 153.4
2010 Male, age 76, both hemispheres 144.3
1927 Female, age 91, both hemispheres 130.9
2246 Female, age 85, both hemispheres 119.0
2531 Female, age 67, both hemispheres 108.1
2528 Male, age 74, both hemispheres 85.3
Entorhinal gyrus
nTPM: 120.6
2117 Female, age 91, right hemisphere 143.3
2686 Male, age 75, right hemisphere 130.5
1938 Female, age 85, left hemisphere 126.1
1787 Male, age 76, left hemisphere 123.3
2764 Male, age 80, right hemisphere 112.9
2613 Female, age 94, left hemisphere 87.8
Hippocampus, CA1
nTPM: 129.5
2749 Male, age 80, left hemisphere 146.3
1873 Female, age 85, both hemispheres 143.3
2045 Male, age 76, both hemispheres 130.3
2527 Male, age 74, both hemispheres 115.1
2082 Female, age 91, right hemisphere 112.7
Hippocampus, CA2
nTPM: 128.9
1963 Male, age 80, left hemisphere 155.6
1892 Male, age 76, both hemispheres 148.6
2437 Female, age 94, left hemisphere 132.0
1940 Female, age 85, left hemisphere 122.6
2249 Male, age 74, both hemispheres 107.6
2113 Female, age 91, right hemisphere 106.7
Hippocampus, CA3
nTPM: 116.5
1867 Male, age 76, both hemispheres 157.4
1891 Female, age 85, both hemispheres 143.3
2137 Male, age 80, left hemisphere 118.7
2861 Female, age 67, both hemispheres 100.9
2436 Male, age 74, both hemispheres 93.0
2620 Female, age 94, left hemisphere 85.6
Parahippocampal cortex
nTPM: 115.6
2018 Male, age 76, both hemispheres 153.6
1850 Male, age 80, both hemispheres 133.5
2250 Female, age 67, right hemisphere 129.4
1990 Female, age 91, right hemisphere 122.3
1933 Female, age 85, both hemispheres 121.7
2245 Female, age 91, both hemispheres 121.2
2532 Female, age 72, left hemisphere 101.4
2622 Female, age 67, right hemisphere 91.8
2693 Female, age 94, both hemispheres 91.5
2692 Male, age 74, both hemispheres 89.3
Perirhinal gyrus
nTPM: 133.5
1841 Female, age 85, right hemisphere 156.9
1847 Female, age 91, left hemisphere 156.7
1794 Male, age 80, right hemisphere 143.0
2848 Male, age 76, right hemisphere 114.0
2521 Female, age 94, right hemisphere 97.2
Subiculum
nTPM: 125.2
1977 Female, age 85, both hemispheres 143.2
2042 Male, age 76, both hemispheres 135.5
2438 Female, age 94, left hemisphere 133.2
1901 Male, age 80, both hemispheres 129.7
2619 Male, age 74, both hemispheres 113.0
2729 Female, age 91, right hemisphere 96.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 536.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 536.7
Samples: 255

Max nTPM: 1825.8
Min nTPM: 274.2
Std nTPM: 170.0
Median nTPM: 501.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1825.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1345.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1084.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1068.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1038.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1009.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 959.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 950.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 912.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 874.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 870.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 128.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.6
FF:10169-103B7 60 years, female 203.5
FF:10153-102I9 76 years, female 53.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 252.6
Pig sample Sample description nTPM
Subiculum
nTPM: 208.2
Samples: 4

Max nTPM: 298.3
Min nTPM: 155.5
Sample A Female 298.3
Sample B Female 208.2
Sample C Male 155.5
Sample D Male 170.9
Dorsal hippocampus
nTPM: 252.6
Samples: 4

Max nTPM: 353.6
Min nTPM: 162.8
Sample A Female 353.6
Sample B Female 241.1
Sample C Male 253.0
Sample D Male 162.8
Entorhinal cortex
nTPM: 211.1
Samples: 4

Max nTPM: 289.5
Min nTPM: 136.8
Sample A Female 168.2
Sample B Female 289.5
Sample C Male 249.8
Sample D Male 136.8
Ventral hippocampus
nTPM: 227.7
Samples: 4

Max nTPM: 249.1
Min nTPM: 203.1
Sample A Female 249.1
Sample B Female 203.1
Sample C Male 241.3
Sample D Male 217.1

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