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  • RPL35A
TISSUE AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Amygdala
Tissue methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:700.9 nTPM
HPA Brain:160.4 nTPM
GTEx:700.9 nTPM
FANTOM5:56.5 Scaled Tags Per Million
Pig:213.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.4
Sample id Sample description nTPM
Amygdala
nTPM: 160.4
2695 Female, age 67, right hemisphere 186.9
2514 Male, age 75, right hemisphere 174.7
1987 Female, age 91, left hemisphere 154.6
2814 Male, age 76, right hemisphere 147.5
2517 Female, age 94, left hemisphere 138.5
Basal amygdala
nTPM: 125.5
2609 Male, age 75, right hemisphere 139.1
2827 Female, age 67, right hemisphere 136.3
2685 Female, age 94, left hemisphere 133.2
2110 Male, age 80, left hemisphere 126.4
1955 Male, age 76, both hemispheres 120.6
2243 Female, age 91, right hemisphere 97.5
Central amygdala
nTPM: 132.8
2826 Female, age 94, left hemisphere 192.7
2515 Male, age 75, right hemisphere 139.8
1905 Male, age 76, both hemispheres 128.4
2239 Male, age 80, left hemisphere 110.7
2701 Female, age 91, right hemisphere 92.2
Corticomedial amygdala
nTPM: 118.9
2829 Male, age 80, left hemisphere 134.3
2429 Female, age 94, left hemisphere 130.9
2428 Male, age 75, right hemisphere 125.0
2242 Female, age 91, right hemisphere 119.7
2240 Male, age 76, both hemispheres 102.7
2535 Female, age 67, right hemisphere 100.5
Lateral amygdala
nTPM: 132.7
2516 Male, age 75, right hemisphere 177.3
2830 Female, age 67, right hemisphere 161.1
2534 Female, age 94, left hemisphere 157.0
1883 Male, age 76, both hemispheres 121.8
2256 Male, age 80, left hemisphere 93.0
2255 Female, age 91, right hemisphere 85.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

700.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 700.9
Samples: 181

Max nTPM: 2238.7
Min nTPM: 323.3
Std nTPM: 266.9
Median nTPM: 632.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2238.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 2109.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1811.2
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 1742.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1605.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1533.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 1435.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1164.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1133.0
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 1090.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1002.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 977.0
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 955.4
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 951.2
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 934.1
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 927.0
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 921.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 921.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 918.2
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 903.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 894.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 857.6
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 849.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 848.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 842.5
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 840.7
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 839.6
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 835.5
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 822.1
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 818.6
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 817.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 814.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 811.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 803.1
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 798.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 797.6
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 790.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 789.2
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 783.5
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 781.9
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 776.8
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 775.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 774.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 769.5
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 765.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 763.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 762.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 759.9
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 755.0
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 753.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 750.8
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 749.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 748.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 746.8
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 744.7
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 743.7
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 733.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 733.3
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 729.4
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 729.0
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 727.1
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 726.8
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 724.2
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 722.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 721.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 721.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 717.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 716.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 706.7
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 705.2
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 703.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 701.8
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 698.8
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 698.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 691.0
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 688.9
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 686.0
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 679.4
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 678.9
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 676.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 672.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 671.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 666.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 659.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 658.3
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 657.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 657.3
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 654.8
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 641.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 636.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 632.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 630.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 630.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 630.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 628.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 628.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 625.4
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 625.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 619.3
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 614.1
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 613.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 611.4
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 611.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 609.6
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 609.2
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 608.4
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 606.7
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 602.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 602.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 601.9
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 601.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 600.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 597.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 596.2
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 594.6
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 592.9
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 591.6
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 590.9
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 590.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 586.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 585.0
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 585.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 584.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 583.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 579.2
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 577.3
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 574.9
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 573.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 570.3
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 567.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 567.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 565.7
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 564.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 562.0
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 561.4
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 557.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 552.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 550.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 549.5
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 548.5
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 547.8
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 540.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 533.4
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 530.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 529.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 528.8
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 528.5
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 527.9
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 524.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 520.7
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 516.6
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 512.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 511.8
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 508.3
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 504.2
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 500.2
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 498.9
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 497.2
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 493.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 492.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 492.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 489.7
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 482.4
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 480.8
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 479.8
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 479.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 472.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 468.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 467.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 465.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 462.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 461.2
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 457.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 442.7
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 438.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 436.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 428.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 409.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 399.1
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 396.5
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 323.3
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

56.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 56.5
FF:10151-102I7 76 years, female 56.5

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.5
Pig sample Sample description nTPM
Amygdala
nTPM: 213.5
Samples: 4

Max nTPM: 274.6
Min nTPM: 122.1
Sample A Female 253.5
Sample B Female 274.6
Sample C Male 203.9
Sample D Male 122.1

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