HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:111.9 nTPM
HPA Brain:119.0 nTPM
GTEx:111.9 nTPM
FANTOM5:467.8 Scaled Tags Per Million
Pig:299.8 nTPM
Mouse:141.6 nTPM
Allen mouse:2.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 119.0
Sample id Sample description nTPM
Hippocampus
nTPM: 116.5
2529 Female, age 94, left hemisphere 125.4
1855 Male, age 76, left hemisphere 122.9
1898 Male, age 80, left hemisphere 117.4
1911 Female, age 85, right hemisphere 113.6
2621 Female, age 67, right hemisphere 110.1
2148 Female, age 91, left hemisphere 109.6
Dentate gyrus
nTPM: 98.8
2246 Female, age 85, both hemispheres 111.9
2530 Female, age 94, left hemisphere 111.8
2528 Male, age 74, both hemispheres 110.8
2010 Male, age 76, both hemispheres 102.6
2531 Female, age 67, both hemispheres 81.3
1927 Female, age 91, both hemispheres 74.8
Entorhinal gyrus
nTPM: 99.0
2117 Female, age 91, right hemisphere 155.3
1938 Female, age 85, left hemisphere 102.4
1787 Male, age 76, left hemisphere 100.6
2764 Male, age 80, right hemisphere 99.5
2686 Male, age 75, right hemisphere 72.2
2613 Female, age 94, left hemisphere 64.2
Hippocampus, CA1
nTPM: 100.6
2527 Male, age 74, both hemispheres 122.4
2749 Male, age 80, left hemisphere 98.3
1873 Female, age 85, both hemispheres 95.6
2082 Female, age 91, right hemisphere 93.8
2045 Male, age 76, both hemispheres 92.8
Hippocampus, CA2
nTPM: 100.2
2249 Male, age 74, both hemispheres 129.6
1940 Female, age 85, left hemisphere 106.1
1892 Male, age 76, both hemispheres 96.5
2437 Female, age 94, left hemisphere 96.2
2113 Female, age 91, right hemisphere 93.0
1963 Male, age 80, left hemisphere 79.7
Hippocampus, CA3
nTPM: 95.4
1891 Female, age 85, both hemispheres 124.7
2436 Male, age 74, both hemispheres 113.8
1867 Male, age 76, both hemispheres 103.9
2620 Female, age 94, left hemisphere 85.3
2137 Male, age 80, left hemisphere 75.9
2861 Female, age 67, both hemispheres 68.8
Parahippocampal cortex
nTPM: 91.9
2250 Female, age 67, right hemisphere 104.1
2245 Female, age 91, both hemispheres 102.6
1990 Female, age 91, right hemisphere 100.6
2018 Male, age 76, both hemispheres 99.7
2532 Female, age 72, left hemisphere 99.7
2692 Male, age 74, both hemispheres 94.3
1850 Male, age 80, both hemispheres 89.5
1933 Female, age 85, both hemispheres 80.3
2693 Female, age 94, both hemispheres 76.0
2622 Female, age 67, right hemisphere 72.4
Perirhinal gyrus
nTPM: 91.2
1794 Male, age 80, right hemisphere 94.7
1847 Female, age 91, left hemisphere 93.2
1841 Female, age 85, right hemisphere 91.0
2848 Male, age 76, right hemisphere 89.3
2521 Female, age 94, right hemisphere 87.9
Subiculum
nTPM: 119.0
2438 Female, age 94, left hemisphere 143.4
2042 Male, age 76, both hemispheres 141.3
2619 Male, age 74, both hemispheres 118.3
1901 Male, age 80, both hemispheres 115.1
1977 Female, age 85, both hemispheres 109.9
2729 Female, age 91, right hemisphere 86.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 111.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.9
Samples: 255

Max nTPM: 217.5
Min nTPM: 29.9
Std nTPM: 30.7
Median nTPM: 110.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 217.5
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 186.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 183.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 179.5
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 176.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 175.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 173.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 169.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 168.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 165.7
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 165.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 467.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 467.8
FF:10169-103B7 60 years, female 506.8
FF:10153-102I9 76 years, female 428.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 299.8
Pig sample Sample description nTPM
Subiculum
nTPM: 265.3
Samples: 4

Max nTPM: 325.7
Min nTPM: 231.3
Sample A Female 325.7
Sample B Female 257.3
Sample C Male 231.3
Sample D Male 246.9
Dorsal hippocampus
nTPM: 299.8
Samples: 4

Max nTPM: 389.7
Min nTPM: 214.5
Sample A Female 389.7
Sample B Female 258.1
Sample C Male 336.9
Sample D Male 214.5
Entorhinal cortex
nTPM: 244.8
Samples: 4

Max nTPM: 262.3
Min nTPM: 200.3
Sample A Female 262.3
Sample B Female 258.4
Sample C Male 258.0
Sample D Male 200.3
Ventral hippocampus
nTPM: 268.0
Samples: 4

Max nTPM: 304.2
Min nTPM: 222.6
Sample A Female 264.8
Sample B Female 222.6
Sample C Male 304.2
Sample D Male 280.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 141.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 139.5
Samples: 4

Max nTPM: 147.6
Min nTPM: 128.6
Sample A Male 143.1
Sample B Male 138.5
Sample C Female 147.6
Sample D Female 128.6
Hippocampal formation
nTPM: 141.7
Samples: 4

Max nTPM: 147.2
Min nTPM: 133.4
Sample A Male 147.2
Sample B Male 133.4
Sample C Female 145.4
Sample D Female 140.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69080518 Antisense, RP_050324_02_C07, Mouse strain C57BL/6J (56 days, male) 2.0

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