ACTG1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • ACTG1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:642.6 nTPM
GTEx:735.1 nTPM
FANTOM5:2108.9 Scaled Tags Per Million
Macaque:400.6 nTPM
Pig:1384.6 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

642.6
Sample id Sample description nTPM
Putamen
nTPM: 642.6
1838 Male, age 80, right hemisphere 757.8
1937 Female, age 91, right hemisphere 694.8
2466 Female, age 79, unknown 691.5
2482 Female, age 94, left hemisphere 606.0
1829 Male, age 74, unknown 594.8
2647 Male, age 75, left hemisphere 584.5
2489 Female, age 72, unknown 568.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

735.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 735.1
Samples: 254

Max nTPM: 1632.4
Min nTPM: 281.7
Std nTPM: 178.6
Median nTPM: 704.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1632.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1400.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1351.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1348.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1278.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1194.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1192.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1138.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1133.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1124.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1118.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1104.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1059.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1047.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1040.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1032.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1005.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 998.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 987.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 984.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 979.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 966.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 956.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 954.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 952.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 946.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 945.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 943.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 942.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 940.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 935.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 931.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 915.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 896.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 893.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 893.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 891.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 890.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 887.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 886.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 876.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 869.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 865.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 863.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 860.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 857.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 854.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 851.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 849.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 848.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 844.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 843.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 842.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 842.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 842.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 840.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 839.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 836.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 833.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 830.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 828.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 821.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 821.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 820.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 820.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 812.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 808.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 807.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 806.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 805.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 804.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 801.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 799.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 795.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 794.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 789.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 789.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 785.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 785.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 783.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 781.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 776.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 776.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 772.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 772.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 770.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 767.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 766.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 766.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 766.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 765.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 765.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 765.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 761.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 759.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 757.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 756.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 752.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 752.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 750.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 746.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 745.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 744.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 742.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 741.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 739.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 736.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 736.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 736.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 734.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 733.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 731.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 730.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 725.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 725.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 720.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 719.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 718.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 715.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 714.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 714.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 712.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 710.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 709.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 708.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 707.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 705.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 704.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 702.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 701.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 701.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 700.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 697.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 696.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 692.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 690.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 690.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 687.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 686.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 686.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 686.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 686.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 685.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 685.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 685.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 683.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 682.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 681.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 681.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 680.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 680.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 677.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 675.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 675.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 674.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 674.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 673.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 673.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 672.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 670.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 670.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 667.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 662.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 660.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 658.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 658.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 653.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 652.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 650.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 649.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 644.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 644.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 642.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 641.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 639.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 635.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 634.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 632.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 631.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 631.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 630.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 630.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 629.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 629.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 628.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 625.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 625.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 623.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 623.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 621.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 620.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 619.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 618.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 618.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 617.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 614.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 608.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 606.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 604.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 603.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 603.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 600.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 599.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 599.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 598.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 593.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 593.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 593.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 592.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 591.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 591.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 590.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 589.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 584.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 584.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 581.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 580.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 577.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 577.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 576.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 575.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 571.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 568.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 567.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 565.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 565.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 563.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 562.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 550.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 545.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 545.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 542.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 540.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 537.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 537.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 536.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 515.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 514.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 507.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 505.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 502.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 494.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 488.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 487.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 484.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 483.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 468.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 467.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 458.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 453.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 441.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 428.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 374.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 281.7
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2108.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2108.9
FF:10176-103C5 60 years, female 2108.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

400.6
Macaque sample Sample description nTPM
Putamen
nTPM: 400.6
Samples: 2

Max nTPM: 408.0
Min nTPM: 393.1
Sample A 408.0
Sample B 393.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1384.6
Pig sample Sample description nTPM
Putamen
nTPM: 1384.6
Samples: 3

Max nTPM: 1746.5
Min nTPM: 1072.1
Sample B Female 1072.1
Sample C Male 1746.5
Sample D Male 1335.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.