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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • H2BC21
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN35 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT10 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM7 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE11 SKIN3 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE DURA MATER EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:32.8 nTPM
GTEx:22.9 nTPM
FANTOM5:151.7 Scaled Tags Per Million
Pig:89.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.8
Sample id Sample description nTPM
Putamen
nTPM: 32.8
2482 Female, age 94, left hemisphere 45.4
2647 Male, age 75, left hemisphere 37.8
1829 Male, age 74, unknown 33.5
2489 Female, age 72, unknown 31.9
1937 Female, age 91, right hemisphere 30.9
2466 Female, age 79, unknown 26.7
1838 Male, age 80, right hemisphere 23.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 22.9
Samples: 254

Max nTPM: 94.4
Min nTPM: 8.4
Std nTPM: 11.7
Median nTPM: 19.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 94.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 87.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 68.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 60.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 58.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 52.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 49.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 46.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 45.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 45.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 44.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 42.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 42.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 42.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 42.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 42.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 41.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 38.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 38.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 38.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 37.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 37.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 36.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 36.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 35.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 35.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 34.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 33.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 33.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 33.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 33.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 32.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 32.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 32.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 31.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 31.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 31.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 30.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 30.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 30.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 30.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 30.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 30.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 29.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 29.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 29.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 29.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 29.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 29.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 28.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 27.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 26.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 26.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 26.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 26.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 26.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 26.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 26.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 25.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 25.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 25.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 25.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 25.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 25.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 25.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 24.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 24.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 24.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 24.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 24.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 24.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 24.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 24.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 24.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 23.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 23.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 23.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 23.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 23.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 23.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 23.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 22.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 22.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 22.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 22.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 22.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 21.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 21.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 21.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 21.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 21.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 21.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 21.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 21.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 21.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 20.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 20.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 20.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 20.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 20.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 20.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 20.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 20.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 20.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 20.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 20.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 19.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 19.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 19.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 19.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 19.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 19.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 19.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 19.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 19.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 19.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 19.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 19.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 19.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 18.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 18.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 18.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 18.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 18.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 18.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 18.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 18.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 18.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 18.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 18.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 18.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 18.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 18.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 18.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 17.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 17.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 17.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 17.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 17.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 17.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 17.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 17.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 17.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 17.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 17.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 17.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 16.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 16.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 16.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 16.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 16.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 16.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 16.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 16.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 16.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 16.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 16.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 16.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 15.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 15.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 15.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 15.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 15.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 15.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 15.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 15.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 15.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 14.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 14.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 14.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 14.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 14.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 14.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 14.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 14.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 14.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 14.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 14.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 14.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 14.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 14.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 14.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 13.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 13.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 13.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 13.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 13.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 13.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 13.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 13.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 13.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 13.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 13.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 12.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 12.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 12.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 12.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 12.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 12.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 12.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 12.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 12.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 12.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 12.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 12.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 11.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 11.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 11.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 11.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 11.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 11.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 10.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 10.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 10.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 9.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 9.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 9.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 8.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 8.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

151.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 151.7
FF:10176-103C5 60 years, female 151.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.9
Pig sample Sample description nTPM
Putamen
nTPM: 89.8
Samples: 3

Max nTPM: 112.4
Min nTPM: 77.7
Sample B Female 79.4
Sample C Male 112.4
Sample D Male 77.7

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