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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
94.9
nTPM
HPA Brain:
170.6
nTPM
GTEx:
94.9
nTPM
FANTOM5:
563.8
Scaled Tags Per Million
Pig:
212.1
nTPM
Mouse:
483.3
nTPM
Allen mouse:
14.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
170.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 145.7
2019
Male, age 18, unknown
179.9
1870
Female, age 42, unknown
178.4
2411
Female, age 72, unknown
166.3
1830
Male, age 51, unknown
164.1
1833
Male, age 53, unknown
161.4
2828
Female, age 72, unknown
154.5
1827
Male, age 72, unknown
119.4
2666
Male, age 74, left hemisphere
115.5
2586
Male, age 75, left hemisphere
110.2
2219
Male, age 76, both hemispheres
107.0
Dorsal raphe nucleus nTPM: 140.0
2750
Male, age 76, both hemispheres
184.0
2016
Female, age 72, unknown
136.0
2298
Female, age 72, unknown
132.5
1828
Male, age 53, unknown
129.8
2047
Male, age 72, unknown
117.7
Inferior colliculus nTPM: 111.7
1848
Female, age 42, unknown
118.3
2097
Female, age 72, unknown
113.8
1890
Male, age 53, unknown
110.4
2849
Male, age 72, unknown
104.4
Median raphe nucleus nTPM: 112.6
2220
Male, age 76, midline
112.6
Periaquaductal grey, anterior nTPM: 131.1
2502
Female, age 75, unknown
138.1
1947
Male, age 18, unknown
134.9
1795
Male, age 51, unknown
120.3
Periaquaductal grey, dorsal nTPM: 107.5
2850
Male, age 76, both hemispheres
117.4
2464
Female, age 72, unknown
117.0
1831
Male, age 72, unknown
105.0
1840
Male, age 53, unknown
90.5
Periaquaductal grey, lateral nTPM: 128.2
2272
Male, age 74, both hemispheres
155.1
2053
Male, age 18, unknown
117.8
2140
Male, age 76, both hemispheres
111.6
Pretectal area nTPM: 132.1
2273
Male, age 74, both hemispheres
161.5
1815
Male, age 53, unknown
146.8
1817
Female, age 42, unknown
141.4
2007
Male, age 72, unknown
139.4
2667
Female, age 75, unknown
138.7
2316
Male, age 76, right hemisphere
138.0
2407
Male, age 75, both hemispheres
133.3
2224
Female, age 72, unknown
121.8
2825
Male, age 18, unknown
112.8
1944
Female, age 72, unknown
112.4
1816
Male, age 51, unknown
106.7
Red nucleus nTPM: 170.6
1904
Male, age 53, unknown
201.6
1865
Male, age 51, unknown
198.2
2785
Male, age 18, unknown
191.5
1821
Female, age 72, unknown
191.0
2769
Male, age 72, unknown
186.6
2227
Male, age 72, unknown
183.4
1954
Female, age 42, unknown
175.9
2823
Male, age 76, right hemisphere
171.8
2503
Female, age 72, unknown
165.6
2725
Female, age 75, unknown
135.6
2584
Male, age 75, left hemisphere
126.4
2588
Male, age 74, left hemisphere
120.1
Substantia nigra nTPM: 130.2
2590
Female, age 75, unknown
148.7
2409
Female, age 72, unknown
148.2
1851
Male, age 51, unknown
147.4
1916
Female, age 42, unknown
136.2
1889
Female, age 72, unknown
132.1
2583
Male, age 75, right hemisphere
126.0
1941
Male, age 53, unknown
121.7
2241
Male, age 72, unknown
121.0
2699
Male, age 18, unknown
118.7
2665
Male, age 74, both hemispheres
102.0
Superior colliculus nTPM: 135.5
1995
Male, age 72, unknown
170.1
1913
Female, age 42, unknown
168.8
2587
Male, age 74, left hemisphere
160.5
1895
Male, age 76, right hemisphere
137.4
1839
Male, age 51, unknown
131.2
2668
Female, age 75, unknown
129.2
1796
Male, age 53, unknown
125.3
2261
Male, age 18, unknown
123.3
2087
Female, age 72, unknown
106.1
2664
Male, age 75, both hemispheres
102.7
Ventral tegmental area nTPM: 138.7
2410
Female, age 72, unknown
167.9
2223
Female, age 72, unknown
159.8
2021
Male, age 53, unknown
130.7
1915
Female, age 42, unknown
130.4
2218
Male, age 76, both hemispheres
122.1
1942
Male, age 51, unknown
121.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
94.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 94.9
Samples: 139
Max nTPM: 238.7
Min nTPM: 60.1
Std nTPM: 26.8
Median nTPM: 88.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
238.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
196.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
179.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
169.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
158.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
158.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
155.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
144.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
144.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
143.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
141.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
137.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
136.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
135.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
124.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
118.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
118.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
118.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
117.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
117.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
115.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
110.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
109.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
109.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
109.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
109.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
108.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
107.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
106.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
103.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
102.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
102.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
102.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
102.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
101.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
101.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
100.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
100.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
100.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
99.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
99.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
99.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
98.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
98.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
97.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
96.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
95.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
95.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
95.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
94.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
94.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
94.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
93.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
93.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
93.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
92.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
92.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
91.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
91.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
91.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
91.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
91.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
91.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
90.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
90.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
89.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
89.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
89.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
89.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
88.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
87.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
87.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
87.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
86.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
86.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
86.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
85.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
85.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
85.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
85.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
84.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
84.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
84.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
83.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
82.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
82.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
82.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
82.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
82.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
82.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
81.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
81.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
81.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
80.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
80.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
80.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
79.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
79.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
79.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
79.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
79.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
78.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
78.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
78.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
78.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
78.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
78.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
78.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
77.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
77.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
77.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
77.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
77.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
76.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
76.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
75.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
74.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
74.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
74.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
74.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
73.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
73.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
73.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
73.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
72.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
70.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
69.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
69.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
69.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
68.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
68.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
68.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
67.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
67.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
66.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
65.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
62.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
60.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
60.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
483.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 483.3
Samples: 4
Max nTPM: 497.2
Min nTPM: 464.6
Sample A
Male
479.2
Sample B
Male
464.6
Sample C
Female
492.3
Sample D
Female
497.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.