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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • GNG2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

252.691
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:66.8 nTPM
HPA Brain:170.8 nTPM
GTEx:66.8 nTPM
Pig:208.0 nTPM
Mouse:201.5 nTPM
Allen mouse:1.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA003534
Hypothalamus mean intensity 252.691
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 120.926
Mammillary nucleus 17.115
Periventricular hypothalamic nucleus 222.075
Supraoptic nucleus 137.594
Tuberal nucleus 136.215
Ventral tuberomammillary nucleus 143.556
Lateral preoptic area 98.057
Medial preoptic area 131.870
Suprachiasmatic nucleus 184.337
Paraventricular hypothalamic nucleus 183.358
Anterior hypothalamic area, central 174.184
Ventral medial hypothalamic nucleus 91.373
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 150.173
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 59.160
Dorsal medial hypothalamic nucleus 87.221
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 151.5
2226 Male, age 75, left hemisphere 199.0
1961 Female, age 42, unknown 104.0
Dorsomedial nucleus
nTPM: 66.2
2041 Female, age 72, unknown 88.1
1989 Male, age 62, unknown 58.1
2017 Female, age 42, unknown 52.3
Lateral hypothalamic area
nTPM: 170.8
2271 Male, age 75, both hemispheres 269.9
2228 Male, age 66, unknown 224.4
1791 Male, age 80, right hemisphere 126.3
2412 Male, age 62, unknown 62.4
Mammillary body
nTPM: 58.8
2413 Male, age 66, unknown 89.6
1923 Female, age 72, unknown 71.1
1945 Male, age 80, right hemisphere 55.3
1948 Female, age 72, unknown 48.1
1834 Female, age 42, unknown 29.9
Paraventricular nucleus
nTPM: 82.3
2700 Male, age 62, unknown 82.3
Preoptic area
nTPM: 72.0
1907 Male, age 80, right hemisphere 100.0
2414 Female, age 72, unknown 74.6
1861 Female, age 42, unknown 41.3
Supraoptic nucleus
nTPM: 54.9
1894 Female, age 72, unknown 71.7
2835 Female, age 72, unknown 50.1
2043 Male, age 62, unknown 43.0
Ventromedial nucleus
nTPM: 103.0
1982 Female, age 72, unknown 103.9
1822 Female, age 42, unknown 102.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 66.8
Samples: 257

Max nTPM: 219.1
Min nTPM: 3.0
Std nTPM: 40.5
Median nTPM: 60.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 219.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 189.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 182.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 182.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 168.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 167.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 157.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 156.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 155.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 151.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 145.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 145.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 142.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 141.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 138.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 136.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 134.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 131.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 129.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 127.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 127.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 126.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 125.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 124.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 123.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 123.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 123.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 121.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 119.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 119.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 118.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 117.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 114.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 113.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 113.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 111.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 110.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 110.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 109.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 108.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 108.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 108.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 108.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 108.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 104.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 103.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 103.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 103.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 102.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 102.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 101.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 100.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 100.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 99.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 97.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 97.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 96.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 96.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 96.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 95.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 94.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 94.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 94.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 94.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 94.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 93.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 91.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 91.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 90.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 89.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 89.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 89.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 88.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 88.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 87.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 86.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 85.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 84.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 84.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 83.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 83.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 82.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 81.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 81.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 80.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 80.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 80.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 79.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 79.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 79.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 79.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 77.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 77.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 77.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 76.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 76.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 76.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 75.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 75.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 74.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 73.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 73.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 73.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 72.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 71.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 69.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 69.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 68.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 68.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 68.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 67.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 67.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 66.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 65.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 64.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 63.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 63.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 63.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 63.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 62.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 62.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 62.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 61.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 61.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 61.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 61.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 60.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 60.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 59.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 58.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 58.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 57.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 57.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 56.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 56.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 55.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 55.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 55.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 54.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 54.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 54.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 54.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 53.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 52.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 51.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 51.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 51.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 51.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 51.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 50.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 50.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 50.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 49.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 48.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 47.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 47.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 47.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 47.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 46.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 46.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 46.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 45.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 45.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 44.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 44.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 44.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 43.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 43.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 42.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 42.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 41.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 41.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 41.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 40.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 38.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 38.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 38.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 37.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 37.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 37.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 37.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 36.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 35.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 35.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 35.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 34.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 34.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 33.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 32.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 32.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 32.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 30.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 30.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 30.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 30.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 30.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 30.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 28.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 28.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 28.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 27.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 27.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 26.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 26.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 25.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 25.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 25.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 25.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 25.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 25.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 24.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 24.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 23.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 22.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 22.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 22.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 21.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 20.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 20.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 20.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 20.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 20.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 19.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 19.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 19.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 18.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 18.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 17.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 17.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 16.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 16.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 14.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 13.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 12.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 12.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 11.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 11.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 10.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 10.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 9.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 8.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 8.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 7.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 7.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 3.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 208.0
Samples: 4

Max nTPM: 273.6
Min nTPM: 173.3
Sample A Female 273.6
Sample B Female 198.1
Sample C Male 173.3
Sample D Male 187.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 201.5
Samples: 4

Max nTPM: 222.9
Min nTPM: 180.1
Sample A Male 193.0
Sample B Male 210.1
Sample C Female 222.9
Sample D Female 180.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.0
67936006 Antisense, RP_040604_01_F06, Mouse strain C57BL/6J (56 days, male) 1.8
76098396 Antisense, RP_060626_01_G09, Mouse strain C57BL/6J (56 days, male) 1.1
77414160 Antisense, RP_070205_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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