HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:158.9 nTPM
HPA Brain:406.5 nTPM
GTEx:158.9 nTPM
FANTOM5:85.8 Scaled Tags Per Million
Pig:126.3 nTPM
Mouse:563.3 nTPM
Allen mouse:26.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026719
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 406.5
Sample id Sample description nTPM
Hippocampus
nTPM: 249.0
1898 Male, age 80, left hemisphere 341.1
2621 Female, age 67, right hemisphere 309.7
2148 Female, age 91, left hemisphere 245.8
1855 Male, age 76, left hemisphere 217.9
1911 Female, age 85, right hemisphere 194.9
2529 Female, age 94, left hemisphere 184.6
Dentate gyrus
nTPM: 279.6
1927 Female, age 91, both hemispheres 383.1
2530 Female, age 94, left hemisphere 350.7
2531 Female, age 67, both hemispheres 277.8
2010 Male, age 76, both hemispheres 228.7
2246 Female, age 85, both hemispheres 226.9
2528 Male, age 74, both hemispheres 210.5
Entorhinal gyrus
nTPM: 341.5
2613 Female, age 94, left hemisphere 510.0
2764 Male, age 80, right hemisphere 401.6
1938 Female, age 85, left hemisphere 361.3
1787 Male, age 76, left hemisphere 321.9
2686 Male, age 75, right hemisphere 286.8
2117 Female, age 91, right hemisphere 167.7
Hippocampus, CA1
nTPM: 277.6
2749 Male, age 80, left hemisphere 441.0
1873 Female, age 85, both hemispheres 288.1
2527 Male, age 74, both hemispheres 244.2
2082 Female, age 91, right hemisphere 216.5
2045 Male, age 76, both hemispheres 198.1
Hippocampus, CA2
nTPM: 280.6
1892 Male, age 76, both hemispheres 379.8
2437 Female, age 94, left hemisphere 340.7
1963 Male, age 80, left hemisphere 306.4
1940 Female, age 85, left hemisphere 256.7
2113 Female, age 91, right hemisphere 211.4
2249 Male, age 74, both hemispheres 188.8
Hippocampus, CA3
nTPM: 292.7
2620 Female, age 94, left hemisphere 356.8
2861 Female, age 67, both hemispheres 353.0
2137 Male, age 80, left hemisphere 347.0
1867 Male, age 76, both hemispheres 286.5
1891 Female, age 85, both hemispheres 214.4
2436 Male, age 74, both hemispheres 198.3
Parahippocampal cortex
nTPM: 319.3
1850 Male, age 80, both hemispheres 383.9
1990 Female, age 91, right hemisphere 375.7
2693 Female, age 94, both hemispheres 362.9
2245 Female, age 91, both hemispheres 341.3
2622 Female, age 67, right hemisphere 323.9
1933 Female, age 85, both hemispheres 317.8
2250 Female, age 67, right hemisphere 297.6
2532 Female, age 72, left hemisphere 290.5
2692 Male, age 74, both hemispheres 285.8
2018 Male, age 76, both hemispheres 213.7
Perirhinal gyrus
nTPM: 406.5
1847 Female, age 91, left hemisphere 554.1
1794 Male, age 80, right hemisphere 443.0
1841 Female, age 85, right hemisphere 376.1
2521 Female, age 94, right hemisphere 371.5
2848 Male, age 76, right hemisphere 287.6
Subiculum
nTPM: 244.2
1977 Female, age 85, both hemispheres 308.8
2438 Female, age 94, left hemisphere 291.6
2619 Male, age 74, both hemispheres 277.1
1901 Male, age 80, both hemispheres 272.5
2042 Male, age 76, both hemispheres 161.1
2729 Female, age 91, right hemisphere 153.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 158.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 158.9
Samples: 255

Max nTPM: 390.6
Min nTPM: 10.3
Std nTPM: 85.4
Median nTPM: 152.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 390.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 360.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 354.9
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 354.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 345.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 339.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 338.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 333.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 329.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 325.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 325.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 85.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.8
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 84.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 126.3
Pig sample Sample description nTPM
Subiculum
nTPM: 103.3
Samples: 4

Max nTPM: 136.3
Min nTPM: 77.4
Sample A Female 136.3
Sample B Female 96.3
Sample C Male 103.1
Sample D Male 77.4
Dorsal hippocampus
nTPM: 119.6
Samples: 4

Max nTPM: 164.7
Min nTPM: 82.3
Sample A Female 164.7
Sample B Female 146.3
Sample C Male 84.9
Sample D Male 82.3
Entorhinal cortex
nTPM: 109.8
Samples: 4

Max nTPM: 123.1
Min nTPM: 87.5
Sample A Female 106.6
Sample B Female 122.0
Sample C Male 123.1
Sample D Male 87.5
Ventral hippocampus
nTPM: 126.3
Samples: 4

Max nTPM: 155.6
Min nTPM: 87.1
Sample A Female 129.0
Sample B Female 87.1
Sample C Male 155.6
Sample D Male 133.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 563.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 563.3
Samples: 4

Max nTPM: 657.8
Min nTPM: 466.3
Sample A Male 553.7
Sample B Male 575.2
Sample C Female 466.3
Sample D Female 657.8
Hippocampal formation
nTPM: 398.7
Samples: 4

Max nTPM: 420.2
Min nTPM: 387.9
Sample A Male 420.2
Sample B Male 387.9
Sample C Female 396.7
Sample D Female 390.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 26.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.2
564653 Antisense, RP_040826_01_B10, Mouse strain C57BL/6J (56 days, male) 26.8
70616006 Antisense, RP_050725_01_D09, Mouse strain C57BL/6J (56 days, male) 25.7

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