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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PLSCR1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:8.1 nTPM
GTEx:16.7 nTPM
FANTOM5:73.5 Scaled Tags Per Million
Pig:2.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.1
Sample id Sample description nTPM
Putamen
nTPM: 8.1
2482 Female, age 94, left hemisphere 11.7
1829 Male, age 74, unknown 9.1
2489 Female, age 72, unknown 8.4
1838 Male, age 80, right hemisphere 7.5
1937 Female, age 91, right hemisphere 7.5
2466 Female, age 79, unknown 6.5
2647 Male, age 75, left hemisphere 6.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 16.7
Samples: 254

Max nTPM: 84.4
Min nTPM: 4.9
Std nTPM: 11.7
Median nTPM: 12.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 84.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 61.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 57.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 53.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 52.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 43.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 42.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 42.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 41.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 40.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 39.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 38.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 37.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 35.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 34.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 34.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 34.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 33.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 33.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 33.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 32.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 32.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 32.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 31.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 30.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 30.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 28.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 28.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 27.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 26.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 26.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 25.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 25.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 25.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 25.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 25.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 24.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 24.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 24.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 23.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 23.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 23.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 22.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 22.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 22.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 22.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 22.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 21.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 21.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 21.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 21.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 20.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 20.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 20.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 20.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 20.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 19.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 19.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 18.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 18.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 18.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 18.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 18.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 17.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 17.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 17.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 17.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 17.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 17.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 17.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 16.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 16.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 16.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 16.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 16.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 16.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 16.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 16.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 16.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 16.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 16.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 15.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 15.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 15.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 15.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 15.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 14.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 14.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 14.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 14.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 14.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 14.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 14.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 13.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 13.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 13.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 13.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 13.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 13.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 13.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 13.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 13.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 13.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 13.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 13.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 13.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 12.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 12.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 12.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 12.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 12.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 12.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 12.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 12.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 12.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 11.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 11.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 11.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 11.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 11.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 11.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 11.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 11.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 11.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 11.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 11.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 11.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 11.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 11.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 10.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 10.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 10.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 10.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 10.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 10.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 10.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 10.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 10.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 10.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 10.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 10.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 10.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 10.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 10.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 10.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 9.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 9.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 9.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 9.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 9.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 9.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 9.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 9.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 9.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 9.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 8.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 8.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 8.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 8.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 8.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 8.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 8.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 8.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 8.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 7.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 7.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 7.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 7.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 7.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 7.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 7.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 7.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 7.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 7.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 7.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 7.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 6.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 6.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 6.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 6.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 5.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 5.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 5.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 5.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 4.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

73.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 73.5
FF:10176-103C5 60 years, female 73.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.1
Pig sample Sample description nTPM
Putamen
nTPM: 2.1
Samples: 3

Max nTPM: 2.3
Min nTPM: 1.9
Sample B Female 1.9
Sample C Male 2.3
Sample D Male 2.2

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