HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:186.1 nTPM
HPA Brain:157.1 nTPM
GTEx:186.1 nTPM
FANTOM5:135.5 Scaled Tags Per Million
Pig:257.9 nTPM
Mouse:388.1 nTPM
Allen mouse:16.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042123Antibody HPA048064Antibody CAB037314
Glial cells LowNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 157.1
Sample id Sample description nTPM
Hippocampus
nTPM: 146.3
1898 Male, age 80, left hemisphere 171.0
1855 Male, age 76, left hemisphere 159.5
2529 Female, age 94, left hemisphere 150.9
1911 Female, age 85, right hemisphere 147.3
2621 Female, age 67, right hemisphere 125.6
2148 Female, age 91, left hemisphere 123.5
Dentate gyrus
nTPM: 138.1
2010 Male, age 76, both hemispheres 165.0
2246 Female, age 85, both hemispheres 148.5
1927 Female, age 91, both hemispheres 144.7
2530 Female, age 94, left hemisphere 139.2
2528 Male, age 74, both hemispheres 127.0
2531 Female, age 67, both hemispheres 104.6
Entorhinal gyrus
nTPM: 120.9
1938 Female, age 85, left hemisphere 151.5
1787 Male, age 76, left hemisphere 133.5
2117 Female, age 91, right hemisphere 126.7
2764 Male, age 80, right hemisphere 116.9
2613 Female, age 94, left hemisphere 107.9
2686 Male, age 75, right hemisphere 89.0
Hippocampus, CA1
nTPM: 157.1
2749 Male, age 80, left hemisphere 203.8
1873 Female, age 85, both hemispheres 169.5
2045 Male, age 76, both hemispheres 157.4
2527 Male, age 74, both hemispheres 133.6
2082 Female, age 91, right hemisphere 121.3
Hippocampus, CA2
nTPM: 141.1
2249 Male, age 74, both hemispheres 160.0
1892 Male, age 76, both hemispheres 158.9
1963 Male, age 80, left hemisphere 141.6
1940 Female, age 85, left hemisphere 138.0
2437 Female, age 94, left hemisphere 125.7
2113 Female, age 91, right hemisphere 122.6
Hippocampus, CA3
nTPM: 145.7
2137 Male, age 80, left hemisphere 195.0
2436 Male, age 74, both hemispheres 162.2
1867 Male, age 76, both hemispheres 151.2
1891 Female, age 85, both hemispheres 144.1
2620 Female, age 94, left hemisphere 123.7
2861 Female, age 67, both hemispheres 97.7
Parahippocampal cortex
nTPM: 133.6
2250 Female, age 67, right hemisphere 162.9
1850 Male, age 80, both hemispheres 154.1
1933 Female, age 85, both hemispheres 149.3
2018 Male, age 76, both hemispheres 148.0
2245 Female, age 91, both hemispheres 146.8
2532 Female, age 72, left hemisphere 136.0
1990 Female, age 91, right hemisphere 128.7
2693 Female, age 94, both hemispheres 115.2
2692 Male, age 74, both hemispheres 98.3
2622 Female, age 67, right hemisphere 96.9
Perirhinal gyrus
nTPM: 151.7
1847 Female, age 91, left hemisphere 167.3
1841 Female, age 85, right hemisphere 154.6
1794 Male, age 80, right hemisphere 151.1
2521 Female, age 94, right hemisphere 148.9
2848 Male, age 76, right hemisphere 136.5
Subiculum
nTPM: 131.0
1977 Female, age 85, both hemispheres 150.3
1901 Male, age 80, both hemispheres 138.6
2042 Male, age 76, both hemispheres 137.9
2729 Female, age 91, right hemisphere 126.4
2438 Female, age 94, left hemisphere 122.7
2619 Male, age 74, both hemispheres 110.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 186.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 186.1
Samples: 255

Max nTPM: 374.1
Min nTPM: 104.1
Std nTPM: 39.8
Median nTPM: 180.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 374.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 346.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 297.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 276.1
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 263.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 263.5
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 262.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 257.6
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 256.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 255.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 255.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 135.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.5
FF:10153-102I9 76 years, female 137.1
FF:10169-103B7 60 years, female 133.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 257.9
Pig sample Sample description nTPM
Subiculum
nTPM: 230.7
Samples: 4

Max nTPM: 284.9
Min nTPM: 193.2
Sample A Female 284.9
Sample B Female 224.4
Sample C Male 193.2
Sample D Male 220.4
Dorsal hippocampus
nTPM: 257.9
Samples: 4

Max nTPM: 305.3
Min nTPM: 222.0
Sample A Female 305.3
Sample B Female 252.0
Sample C Male 252.2
Sample D Male 222.0
Entorhinal cortex
nTPM: 228.4
Samples: 4

Max nTPM: 263.4
Min nTPM: 178.5
Sample A Female 233.4
Sample B Female 263.4
Sample C Male 238.4
Sample D Male 178.5
Ventral hippocampus
nTPM: 221.0
Samples: 4

Max nTPM: 238.9
Min nTPM: 204.4
Sample A Female 233.7
Sample B Female 204.4
Sample C Male 207.0
Sample D Male 238.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 388.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 367.8
Samples: 4

Max nTPM: 386.6
Min nTPM: 349.2
Sample A Male 349.2
Sample B Male 364.9
Sample C Female 386.6
Sample D Female 370.5
Hippocampal formation
nTPM: 388.1
Samples: 4

Max nTPM: 431.0
Min nTPM: 362.1
Sample A Male 431.0
Sample B Male 392.4
Sample C Female 366.9
Sample D Female 362.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.3
74990518 Antisense, RP_060410_01_B12, Mouse strain C57BL/6J (56 days, male) 16.3

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