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  • TISSUE

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  • NDUFA4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:144.1 nTPM
HPA Brain:112.2 nTPM
GTEx:144.1 nTPM
Pig:350.0 nTPM
Mouse:722.0 nTPM
Allen mouse:3.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.5
2226 Male, age 75, left hemisphere 65.7
1961 Female, age 42, unknown 45.4
Dorsomedial nucleus
nTPM: 61.5
1989 Male, age 62, unknown 79.3
2017 Female, age 42, unknown 53.8
2041 Female, age 72, unknown 51.4
Lateral hypothalamic area
nTPM: 79.5
2228 Male, age 66, unknown 94.6
1791 Male, age 80, right hemisphere 90.4
2271 Male, age 75, both hemispheres 80.3
2412 Male, age 62, unknown 52.7
Mammillary body
nTPM: 112.2
1923 Female, age 72, unknown 190.1
1948 Female, age 72, unknown 102.3
2413 Male, age 66, unknown 97.9
1834 Female, age 42, unknown 95.4
1945 Male, age 80, right hemisphere 75.2
Paraventricular nucleus
nTPM: 51.6
2700 Male, age 62, unknown 51.6
Preoptic area
nTPM: 60.8
1907 Male, age 80, right hemisphere 66.6
1861 Female, age 42, unknown 63.2
2414 Female, age 72, unknown 52.6
Supraoptic nucleus
nTPM: 65.3
1894 Female, age 72, unknown 83.8
2043 Male, age 62, unknown 59.9
2835 Female, age 72, unknown 52.1
Ventromedial nucleus
nTPM: 59.0
1982 Female, age 72, unknown 70.2
1822 Female, age 42, unknown 47.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 144.1
Samples: 257

Max nTPM: 403.7
Min nTPM: 46.9
Std nTPM: 64.6
Median nTPM: 124.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 403.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 391.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 385.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 359.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 344.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 344.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 342.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 334.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 325.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 320.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 296.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 286.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 281.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 278.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 271.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 270.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 266.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 260.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 260.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 256.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 250.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 244.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 240.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 238.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 236.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 230.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 227.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 220.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 220.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 216.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 215.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 212.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 210.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 205.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 203.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 200.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 199.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 197.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 197.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 196.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 194.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 192.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 191.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 187.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 186.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 186.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 186.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 183.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 183.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 180.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 180.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 179.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 179.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 177.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 176.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 175.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 174.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 173.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 173.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 172.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 172.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 172.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 170.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 169.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 168.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 167.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 164.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 164.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 164.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 163.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 162.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 162.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 160.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 158.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 158.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 158.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 155.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 155.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 154.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 154.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 154.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 153.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 152.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 152.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 152.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 152.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 151.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 151.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 149.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 147.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 147.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 146.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 146.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 146.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 146.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 144.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 143.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 143.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 143.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 142.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 142.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 141.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 141.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 141.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 140.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 136.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 136.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 136.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 134.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 133.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 132.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 132.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 132.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 132.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 131.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 131.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 130.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 130.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 130.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 129.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 129.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 128.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 127.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 126.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 126.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 126.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 125.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 125.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 124.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 124.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 124.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 123.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 122.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 121.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 120.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 120.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 120.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 120.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 119.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 119.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 119.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 117.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 117.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 117.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 115.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 115.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 114.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 114.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 114.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 114.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 114.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 114.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 114.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 113.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 113.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 113.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 113.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 112.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 112.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 112.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 112.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 112.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 112.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 111.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 111.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 111.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 111.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 110.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 110.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 109.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 109.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 109.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 109.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 108.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 107.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 107.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 107.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 106.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 106.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 106.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 106.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 106.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 105.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 105.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 105.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 105.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 105.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 105.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 104.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 104.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 103.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 103.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 103.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 102.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 101.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 101.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 101.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 99.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 99.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 99.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 99.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 98.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 98.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 98.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 97.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 96.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 96.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 96.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 96.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 95.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 95.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 95.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 95.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 94.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 93.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 93.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 92.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 91.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 91.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 90.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 90.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 89.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 88.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 88.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 88.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 88.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 87.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 87.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 87.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 86.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 86.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 85.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 84.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 83.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 83.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 83.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 82.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 81.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 81.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 80.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 79.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 77.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 76.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 75.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 74.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 73.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 71.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 71.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 71.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 69.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 66.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 66.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 65.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 64.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 59.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 51.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 46.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

350.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 350.0
Samples: 4

Max nTPM: 482.3
Min nTPM: 216.4
Sample A Female 482.3
Sample B Female 412.5
Sample C Male 288.7
Sample D Male 216.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

722.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 722.0
Samples: 4

Max nTPM: 775.0
Min nTPM: 677.5
Sample A Male 677.5
Sample B Male 775.0
Sample C Female 720.5
Sample D Female 714.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.6
69782139 Antisense, RP_050505_02_D07, Mouse strain C57BL/6J (56 days, male) 3.6

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