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SERPINA3
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SERPINA3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:150.9 nTPM
HPA Brain:561.0 nTPM
GTEx:150.9 nTPM
Pig:0.0 nTPM
Mouse:0.0 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

561.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 63.1
2226 Male, age 75, left hemisphere 89.8
1961 Female, age 42, unknown 36.3
Dorsomedial nucleus
nTPM: 85.5
2017 Female, age 42, unknown 143.2
1989 Male, age 62, unknown 65.0
2041 Female, age 72, unknown 48.4
Lateral hypothalamic area
nTPM: 125.7
1791 Male, age 80, right hemisphere 220.9
2228 Male, age 66, unknown 111.4
2271 Male, age 75, both hemispheres 107.6
2412 Male, age 62, unknown 62.9
Mammillary body
nTPM: 215.1
1834 Female, age 42, unknown 331.8
1923 Female, age 72, unknown 237.1
2413 Male, age 66, unknown 209.5
1948 Female, age 72, unknown 154.9
1945 Male, age 80, right hemisphere 142.4
Paraventricular nucleus
nTPM: 80.3
2700 Male, age 62, unknown 80.3
Preoptic area
nTPM: 94.7
1907 Male, age 80, right hemisphere 140.1
2414 Female, age 72, unknown 93.4
1861 Female, age 42, unknown 50.4
Supraoptic nucleus
nTPM: 561.0
1894 Female, age 72, unknown 1038.1
2043 Male, age 62, unknown 561.3
2835 Female, age 72, unknown 83.6
Ventromedial nucleus
nTPM: 55.2
1822 Female, age 42, unknown 90.5
1982 Female, age 72, unknown 19.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 150.9
Samples: 257

Max nTPM: 3311.5
Min nTPM: 1.7
Std nTPM: 350.8
Median nTPM: 36.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 3311.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2879.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1912.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1225.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1178.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1137.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1004.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 871.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 822.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 724.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 712.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 664.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 653.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 649.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 617.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 603.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 588.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 531.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 530.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 527.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 508.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 432.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 420.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 419.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 416.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 410.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 398.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 394.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 392.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 367.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 365.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 336.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 327.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 305.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 278.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 266.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 262.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 260.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 253.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 252.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 246.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 240.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 231.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 230.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 217.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 202.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 184.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 181.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 178.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 174.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 156.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 151.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 148.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 148.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 145.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 145.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 143.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 130.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 129.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 125.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 124.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 117.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 115.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 115.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 113.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 110.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 110.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 105.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 104.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 102.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 97.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 94.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 94.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 93.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 92.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 91.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 90.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 89.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 88.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 87.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 85.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 84.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 84.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 84.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 82.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 77.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 74.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 71.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 70.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 69.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 68.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 67.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 67.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 66.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 65.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 65.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 64.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 64.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 64.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 61.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 61.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 60.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 59.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 59.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 57.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 57.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 57.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 56.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 56.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 55.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 55.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 53.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 53.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 53.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 52.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 51.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 50.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 49.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 49.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 48.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 45.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 45.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 38.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 37.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 37.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 36.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 36.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 36.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 33.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 33.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 33.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 33.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 32.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 32.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 32.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 31.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 31.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 31.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 31.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 30.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 29.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 29.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 29.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 28.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 28.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 27.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 26.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 26.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 26.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 25.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 25.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 24.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 24.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 24.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 23.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 23.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 23.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 23.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 23.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 23.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 22.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 22.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 22.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 22.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 22.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 22.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 22.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 21.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 21.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 21.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 21.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 20.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 20.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 19.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 19.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 19.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 19.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 19.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 19.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 19.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 17.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 17.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 16.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 16.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 15.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 15.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 15.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 15.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 14.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 14.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 14.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 14.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 14.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 13.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 13.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 13.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 13.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 13.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 13.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 13.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 12.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 11.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 11.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 11.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 10.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 10.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 10.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 10.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 10.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 9.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 9.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 9.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 9.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 9.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 9.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 9.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 8.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 8.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 8.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 8.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 8.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 8.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 8.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 8.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 8.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 8.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 7.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 7.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 7.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 7.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 7.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 7.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 6.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 6.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 6.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 6.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 6.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 6.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 6.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 5.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 4.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 4.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 4.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 4.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 4.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 4.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 3.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 2.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 2.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 2.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 2.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 1.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 52.7
Samples: 4

Max nTPM: 58.0
Min nTPM: 45.5
Sample A Male 58.0
Sample B Male 54.5
Sample C Female 52.6
Sample D Female 45.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0
Hypothalamus
Expression energy: 0.2
69549296 Antisense, RP_050126_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
75860996 Antisense, RP_060601_03_A05, Mouse strain C57BL/6J (56 days, male) 0.2
72081514 Antisense, RP_051017_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
75043155 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
75694278 Antisense, RP_060412_05_B06, Mouse strain C57BL/6J (56 days, male) 0.1
70228304 Antisense, RP_050524_03_C05, Mouse strain C57BL/6J (56 days, male) 0.0
71574552 Antisense, RP_050915_03_H10, Mouse strain C57BL/6J (56 days, male) 0.0

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