SERPINA3
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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • SERPINA3
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:73.7 nTPM
GTEx:116.7 nTPM
FANTOM5:139.4 Scaled Tags Per Million
Macaque:2.0 nTPM
Pig:0.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.7
Sample id Sample description nTPM
Putamen
nTPM: 73.7
2482 Female, age 94, left hemisphere 216.0
2489 Female, age 72, unknown 112.4
1838 Male, age 80, right hemisphere 75.4
1829 Male, age 74, unknown 39.0
1937 Female, age 91, right hemisphere 36.5
2466 Female, age 79, unknown 31.2
2647 Male, age 75, left hemisphere 5.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 116.7
Samples: 254

Max nTPM: 1752.9
Min nTPM: 0.7
Std nTPM: 233.8
Median nTPM: 19.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1752.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1326.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1209.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 934.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 905.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 830.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 819.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 803.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 797.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 759.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 755.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 734.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 654.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 580.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 549.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 539.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 538.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 514.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 495.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 476.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 449.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 445.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 434.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 413.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 351.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 341.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 294.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 286.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 279.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 270.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 264.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 245.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 245.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 242.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 240.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 233.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 221.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 216.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 211.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 205.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 201.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 190.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 187.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 185.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 184.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 182.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 177.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 174.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 161.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 157.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 156.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 154.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 152.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 151.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 145.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 140.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 138.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 132.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 132.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 132.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 126.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 126.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 124.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 116.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 112.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 100.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 91.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 89.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 81.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 76.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 75.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 75.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 72.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 71.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 69.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 69.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 68.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 64.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 60.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 60.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 59.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 59.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 59.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 59.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 55.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 54.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 51.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 49.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 49.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 49.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 48.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 48.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 40.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 39.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 38.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 38.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 36.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 36.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 35.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 34.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 34.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 32.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 29.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 28.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 27.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 27.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 26.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 26.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 26.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 26.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 24.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 23.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 22.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 22.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 21.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 20.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 20.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 19.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 19.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 18.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 18.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 17.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 17.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 16.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 16.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 16.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 16.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 15.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 15.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 14.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 14.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 13.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 13.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 13.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 13.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 12.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 12.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 12.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 12.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 12.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 11.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 11.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 11.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 11.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 10.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 10.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 10.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 10.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 9.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 9.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 8.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 8.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 8.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 8.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 7.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 7.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 7.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 7.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 7.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 7.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 7.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 6.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 6.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 5.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 5.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 5.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 5.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 5.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 5.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 4.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 4.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 4.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 4.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 4.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 4.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 4.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 4.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 4.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 4.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 3.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 3.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 3.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 3.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 3.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 3.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 3.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 3.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 3.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 3.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 2.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 2.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 2.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 2.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 2.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 0.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 0.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

139.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 139.4
FF:10176-103C5 60 years, female 139.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.0
Macaque sample Sample description nTPM
Putamen
nTPM: 2.0
Samples: 2

Max nTPM: 3.0
Min nTPM: 1.0
Sample A 1.0
Sample B 3.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Putamen
nTPM: 0.0
Samples: 3

Max nTPM: 0.0
Min nTPM: 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

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