HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:5.5 nTPM
HPA Brain:15.3 nTPM
GTEx:5.5 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:6.7 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015642Antibody CAB024712
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
1911 Female, age 85, right hemisphere 14.7
2529 Female, age 94, left hemisphere 14.1
2621 Female, age 67, right hemisphere 12.8
1855 Male, age 76, left hemisphere 12.7
1898 Male, age 80, left hemisphere 11.4
2148 Female, age 91, left hemisphere 8.0
Dentate gyrus
nTPM: 11.2
2246 Female, age 85, both hemispheres 15.0
2530 Female, age 94, left hemisphere 11.8
2010 Male, age 76, both hemispheres 11.1
2528 Male, age 74, both hemispheres 10.1
2531 Female, age 67, both hemispheres 9.7
1927 Female, age 91, both hemispheres 9.2
Entorhinal gyrus
nTPM: 13.0
2686 Male, age 75, right hemisphere 14.2
1938 Female, age 85, left hemisphere 13.9
2613 Female, age 94, left hemisphere 13.6
2117 Female, age 91, right hemisphere 13.1
1787 Male, age 76, left hemisphere 11.5
2764 Male, age 80, right hemisphere 11.3
Hippocampus, CA1
nTPM: 15.3
2082 Female, age 91, right hemisphere 20.1
2749 Male, age 80, left hemisphere 18.9
2527 Male, age 74, both hemispheres 17.7
1873 Female, age 85, both hemispheres 11.2
2045 Male, age 76, both hemispheres 8.6
Hippocampus, CA2
nTPM: 13.8
2113 Female, age 91, right hemisphere 17.4
1940 Female, age 85, left hemisphere 14.4
2249 Male, age 74, both hemispheres 14.1
2437 Female, age 94, left hemisphere 13.2
1892 Male, age 76, both hemispheres 12.1
1963 Male, age 80, left hemisphere 11.6
Hippocampus, CA3
nTPM: 11.9
2137 Male, age 80, left hemisphere 17.6
2436 Male, age 74, both hemispheres 13.3
1867 Male, age 76, both hemispheres 12.8
2861 Female, age 67, both hemispheres 11.6
1891 Female, age 85, both hemispheres 10.0
2620 Female, age 94, left hemisphere 5.9
Parahippocampal cortex
nTPM: 14.8
2693 Female, age 94, both hemispheres 19.8
1933 Female, age 85, both hemispheres 16.9
2250 Female, age 67, right hemisphere 16.7
2018 Male, age 76, both hemispheres 16.2
2532 Female, age 72, left hemisphere 15.6
2245 Female, age 91, both hemispheres 14.9
2622 Female, age 67, right hemisphere 13.6
1850 Male, age 80, both hemispheres 12.9
1990 Female, age 91, right hemisphere 10.5
2692 Male, age 74, both hemispheres 10.5
Perirhinal gyrus
nTPM: 14.9
2521 Female, age 94, right hemisphere 17.5
1794 Male, age 80, right hemisphere 15.4
1841 Female, age 85, right hemisphere 15.3
1847 Female, age 91, left hemisphere 14.7
2848 Male, age 76, right hemisphere 11.4
Subiculum
nTPM: 12.0
1977 Female, age 85, both hemispheres 16.4
1901 Male, age 80, both hemispheres 12.4
2042 Male, age 76, both hemispheres 11.6
2619 Male, age 74, both hemispheres 11.6
2729 Female, age 91, right hemisphere 10.2
2438 Female, age 94, left hemisphere 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.5
Samples: 197

Max nTPM: 11.0
Min nTPM: 2.4
Std nTPM: 1.6
Median nTPM: 5.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 11.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 9.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 9.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 9.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 9.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 9.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 8.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 8.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 8.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 8.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 8.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 17.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.4
Pig sample Sample description nTPM
Subiculum
nTPM: 13.4
Samples: 4

Max nTPM: 17.4
Min nTPM: 10.9
Sample A Female 17.4
Sample B Female 12.7
Sample C Male 10.9
Sample D Male 12.5
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.4
Sample A Female 8.7
Sample B Female 11.5
Sample C Male 8.4
Sample D Male 13.1
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.8
Sample A Female 14.8
Sample B Female 11.8
Sample C Male 12.4
Sample D Male 11.9
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 10.3
Sample C Male 11.2
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 8.6
Min nTPM: 4.8
Sample A Male 6.8
Sample B Male 6.7
Sample C Female 4.8
Sample D Female 8.6
Hippocampal formation
nTPM: 5.2
Samples: 4

Max nTPM: 6.6
Min nTPM: 3.5
Sample A Male 3.5
Sample B Male 5.6
Sample C Female 6.6
Sample D Female 5.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69114938 Antisense, RP_050317_02_D02, Mouse strain C57BL/6J (56 days, male) 2.1
74425569 Antisense, RP_051214_02_H10, Mouse strain C57BL/6J (56 days, male) 1.4

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