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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • NACA
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:217.6 nTPM
GTEx:710.2 nTPM
FANTOM5:267.2 Scaled Tags Per Million
Macaque:139.6 nTPM
Pig:143.7 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.6
Sample id Sample description nTPM
Putamen
nTPM: 217.6
2466 Female, age 79, unknown 250.0
1829 Male, age 74, unknown 242.7
1838 Male, age 80, right hemisphere 230.3
1937 Female, age 91, right hemisphere 228.1
2482 Female, age 94, left hemisphere 223.5
2647 Male, age 75, left hemisphere 187.0
2489 Female, age 72, unknown 161.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

710.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 710.2
Samples: 254

Max nTPM: 1364.4
Min nTPM: 391.3
Std nTPM: 160.3
Median nTPM: 689.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1364.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1284.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1269.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1153.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1119.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1065.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1060.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1045.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1033.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1022.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1003.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 993.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 992.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 991.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 986.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 985.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 980.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 977.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 974.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 960.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 952.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 951.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 950.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 950.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 949.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 946.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 943.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 938.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 934.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 930.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 930.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 926.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 910.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 897.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 894.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 887.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 884.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 883.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 880.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 873.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 868.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 859.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 859.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 857.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 853.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 846.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 845.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 841.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 839.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 838.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 838.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 838.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 837.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 835.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 833.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 833.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 832.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 830.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 813.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 806.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 804.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 803.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 790.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 788.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 786.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 783.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 781.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 780.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 780.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 779.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 774.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 770.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 768.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 764.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 763.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 761.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 760.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 757.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 755.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 755.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 754.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 753.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 751.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 750.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 746.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 743.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 742.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 738.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 737.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 736.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 734.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 734.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 729.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 729.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 728.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 727.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 723.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 722.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 721.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 719.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 717.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 716.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 716.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 715.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 714.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 713.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 713.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 713.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 713.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 713.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 712.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 711.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 709.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 709.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 708.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 706.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 705.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 705.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 701.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 700.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 700.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 699.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 697.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 695.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 693.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 693.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 690.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 688.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 687.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 687.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 686.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 684.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 681.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 679.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 679.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 676.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 676.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 676.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 673.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 670.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 669.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 669.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 666.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 666.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 661.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 660.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 660.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 658.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 655.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 653.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 653.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 647.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 647.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 647.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 642.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 641.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 641.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 640.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 639.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 637.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 637.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 634.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 631.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 630.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 628.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 628.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 625.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 622.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 621.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 617.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 615.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 614.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 614.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 613.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 613.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 611.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 608.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 608.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 607.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 607.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 607.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 603.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 601.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 601.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 600.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 600.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 600.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 600.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 599.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 595.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 593.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 592.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 592.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 592.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 592.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 591.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 589.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 588.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 582.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 580.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 578.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 576.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 574.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 572.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 569.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 564.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 564.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 564.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 562.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 556.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 556.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 553.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 552.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 551.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 550.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 548.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 543.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 543.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 541.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 538.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 536.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 536.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 536.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 534.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 533.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 532.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 532.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 531.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 529.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 529.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 527.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 524.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 524.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 521.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 521.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 520.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 517.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 517.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 514.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 513.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 513.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 511.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 507.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 496.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 487.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 487.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 487.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 483.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 481.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 477.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 465.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 444.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 444.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 391.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

267.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 267.2
FF:10176-103C5 60 years, female 267.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.6
Macaque sample Sample description nTPM
Putamen
nTPM: 139.6
Samples: 2

Max nTPM: 160.8
Min nTPM: 118.4
Sample A 118.4
Sample B 160.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.7
Pig sample Sample description nTPM
Putamen
nTPM: 143.7
Samples: 3

Max nTPM: 180.9
Min nTPM: 115.6
Sample B Female 115.6
Sample C Male 180.9
Sample D Male 134.5

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