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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • PCBP2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:302.6 nTPM
GTEx:190.8 nTPM
FANTOM5:887.8 Scaled Tags Per Million
Macaque:0.5 nTPM
Pig:228.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

302.6
Sample id Sample description nTPM
Putamen
nTPM: 302.6
2482 Female, age 94, left hemisphere 364.0
1829 Male, age 74, unknown 323.5
1838 Male, age 80, right hemisphere 296.7
2466 Female, age 79, unknown 290.3
1937 Female, age 91, right hemisphere 290.1
2647 Male, age 75, left hemisphere 278.8
2489 Female, age 72, unknown 274.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

190.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 190.8
Samples: 254

Max nTPM: 271.2
Min nTPM: 136.2
Std nTPM: 22.8
Median nTPM: 187.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 271.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 267.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 266.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 257.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 253.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 252.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 247.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 244.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 238.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 234.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 233.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 232.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 231.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 230.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 228.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 227.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 227.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 226.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 226.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 225.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 224.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 223.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 222.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 220.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 220.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 220.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 219.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 219.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 218.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 218.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 218.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 218.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 218.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 217.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 217.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 216.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 215.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 214.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 213.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 213.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 212.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 212.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 212.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 211.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 209.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 208.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 208.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 207.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 207.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 207.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 207.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 207.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 206.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 206.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 205.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 205.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 205.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 204.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 204.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 204.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 203.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 203.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 203.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 202.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 202.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 201.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 201.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 201.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 201.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 201.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 200.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 200.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 200.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 200.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 199.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 199.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 198.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 198.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 198.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 198.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 197.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 197.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 197.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 197.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 197.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 197.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 197.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 197.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 196.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 195.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 195.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 195.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 195.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 195.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 194.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 194.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 194.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 194.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 193.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 193.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 193.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 193.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 193.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 193.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 193.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 192.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 192.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 192.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 192.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 192.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 191.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 191.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 190.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 190.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 190.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 190.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 190.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 190.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 190.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 189.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 189.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 189.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 189.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 189.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 188.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 188.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 187.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 186.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 186.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 186.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 186.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 186.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 186.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 186.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 185.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 185.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 185.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 185.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 185.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 185.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 185.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 185.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 185.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 185.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 184.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 184.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 183.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 183.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 183.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 183.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 183.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 183.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 183.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 182.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 182.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 182.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 182.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 182.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 182.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 182.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 182.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 181.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 181.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 181.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 180.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 180.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 180.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 180.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 180.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 180.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 180.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 179.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 179.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 179.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 179.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 179.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 178.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 178.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 178.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 177.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 177.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 177.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 177.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 177.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 176.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 176.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 175.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 175.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 175.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 175.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 175.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 175.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 175.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 174.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 174.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 174.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 174.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 174.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 174.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 173.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 173.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 173.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 173.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 173.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 172.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 172.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 171.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 171.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 171.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 170.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 170.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 170.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 169.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 169.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 169.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 168.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 168.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 168.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 168.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 168.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 167.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 167.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 167.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 167.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 167.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 166.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 164.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 164.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 163.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 163.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 163.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 162.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 162.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 162.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 162.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 161.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 160.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 160.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 160.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 159.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 159.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 158.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 157.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 156.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 154.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 154.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 153.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 152.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 150.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 149.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 149.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 145.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 142.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 136.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

887.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 887.8
FF:10176-103C5 60 years, female 887.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.5
Macaque sample Sample description nTPM
Putamen
nTPM: 0.5
Samples: 2

Max nTPM: 0.6
Min nTPM: 0.4
Sample A 0.4
Sample B 0.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

228.0
Pig sample Sample description nTPM
Putamen
nTPM: 228.0
Samples: 3

Max nTPM: 265.7
Min nTPM: 186.2
Sample B Female 186.2
Sample C Male 265.7
Sample D Male 232.2

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