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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • OPALIN
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:87.9 nTPM
GTEx:139.3 nTPM
FANTOM5:112.3 Scaled Tags Per Million
Macaque:90.5 nTPM
Pig:340.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.9
Sample id Sample description nTPM
Putamen
nTPM: 87.9
1829 Male, age 74, unknown 133.7
2489 Female, age 72, unknown 111.5
2482 Female, age 94, left hemisphere 105.0
1937 Female, age 91, right hemisphere 86.4
2647 Male, age 75, left hemisphere 77.4
2466 Female, age 79, unknown 66.9
1838 Male, age 80, right hemisphere 34.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 139.3
Samples: 254

Max nTPM: 465.9
Min nTPM: 9.4
Std nTPM: 69.4
Median nTPM: 134.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 465.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 388.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 382.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 380.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 344.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 328.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 289.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 289.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 287.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 278.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 268.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 261.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 254.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 253.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 251.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 251.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 246.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 245.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 233.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 231.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 228.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 226.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 221.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 219.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 219.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 217.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 216.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 216.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 214.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 211.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 211.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 209.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 207.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 207.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 207.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 202.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 200.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 199.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 197.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 196.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 194.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 194.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 194.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 194.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 193.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 191.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 191.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 191.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 191.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 188.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 188.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 186.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 186.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 185.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 185.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 185.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 184.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 183.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 183.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 183.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 183.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 182.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 182.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 182.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 182.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 181.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 181.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 179.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 179.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 179.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 177.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 176.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 173.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 171.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 170.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 170.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 168.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 167.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 166.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 165.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 163.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 162.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 160.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 160.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 159.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 157.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 156.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 156.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 155.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 154.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 154.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 153.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 151.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 150.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 149.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 149.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 149.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 148.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 147.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 146.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 146.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 145.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 145.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 144.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 144.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 143.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 143.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 143.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 143.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 142.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 142.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 142.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 141.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 141.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 140.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 139.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 139.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 139.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 139.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 138.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 137.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 137.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 136.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 135.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 134.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 134.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 134.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 134.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 133.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 132.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 132.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 130.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 129.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 129.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 129.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 128.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 126.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 126.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 125.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 124.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 124.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 124.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 123.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 123.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 121.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 119.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 119.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 119.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 119.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 118.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 117.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 117.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 116.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 116.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 116.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 115.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 115.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 115.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 115.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 113.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 113.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 112.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 111.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 110.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 109.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 108.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 106.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 105.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 104.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 104.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 102.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 101.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 100.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 100.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 100.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 99.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 97.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 97.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 96.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 95.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 95.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 94.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 92.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 91.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 91.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 90.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 88.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 85.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 84.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 84.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 84.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 84.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 83.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 83.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 82.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 82.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 80.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 80.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 78.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 78.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 77.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 77.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 75.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 75.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 74.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 70.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 69.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 69.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 68.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 67.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 67.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 66.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 66.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 65.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 65.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 64.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 62.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 62.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 59.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 59.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 59.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 58.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 57.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 56.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 56.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 54.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 54.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 53.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 50.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 49.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 48.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 48.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 47.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 47.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 41.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 40.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 39.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 34.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 25.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 21.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 12.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 9.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

112.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 112.3
FF:10176-103C5 60 years, female 112.3

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.5
Macaque sample Sample description nTPM
Putamen
nTPM: 90.5
Samples: 2

Max nTPM: 104.4
Min nTPM: 76.6
Sample A 76.6
Sample B 104.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

340.7
Pig sample Sample description nTPM
Putamen
nTPM: 340.8
Samples: 3

Max nTPM: 456.5
Min nTPM: 235.6
Sample B Female 235.6
Sample C Male 330.2
Sample D Male 456.5

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