PHF2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PHF2
EVOLUTIONARY SPLEEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Bone marrow & Lymphoid tissues
Evolutionary methods
SPLEEN - Expression summary
Protein expression
Spleeni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in red pulp: High
Cells in white pulp: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:22.6 nTPM
HPA:19.1 nTPM
GTEx:22.6 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Macaque:18.4 nTPM
Mouse:13.7 nTPM
Rat:36.8 nTPM
Pig:36.9 nTPM
SPLEEN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPLEEN - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA010831
Cells in red pulp High
Cells in white pulp Medium



SPLEEN - PROTEINTALKS DB MS
Median intensity 1441
Sample Intensity
Spleen_01
1441
Spleen_02
1398
Spleen_03
1575

SPLEEN - MANN MS
Median intensity 2075828
Replicate Intensity
Spleen_01
2075828
Spleen_02
2269501
Spleen_03
1959445

SPLEEN - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
overview
Female, age 60
Spleen sample 236
nTPM: 19.5
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Male, age 17
Spleen sample 237
nTPM: 18.4
Cell types%
Lymphocytes:
40

Macrophages:
35

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
5

overview
Male, age 20
Spleen sample 238
nTPM: 19
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Female, age 19
Spleen sample 239
nTPM: 23
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 65
Spleen sample 378
nTPM: 15.8
Cell types%
Lymphocytes:
35

Macrophages:
30

Endothelial cells:
20

Fibroblasts:
10

Other cell types:
5


SPLEEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.6
GTEx sample id Sample description nTPM
Spleen
Average nTPM: 22.6
Samples: 277

Max nTPM: 37.9
Min nTPM: 13.4
Std nTPM: 3.2
Median nTPM: 22.2
GTEX-16MT8-1826-SM-7EWE8 60-69 years, female 37.9
GTEX-15CHQ-1226-SM-6ETZL 60-69 years, male 33.1
GTEX-17F96-1426-SM-7IGQA 70-79 years, male 33.1
GTEX-1K9T9-0626-SM-CXZKY 50-59 years, female 32.9
GTEX-111FC-1326-SM-5N9D9 60-69 years, male 31.6
GTEX-16MT9-1726-SM-6M47P 60-69 years, female 31.5
GTEX-1C6VQ-2126-SM-7IGNL 50-59 years, male 31.5
GTEX-1KD5A-1526-SM-D4P3W 50-59 years, male 31.3
GTEX-1JMPZ-0926-SM-CXZJR 30-39 years, male 30.6
GTEX-14PK6-0526-SM-69LOF 70-79 years, female 30.5
GTEX-15ER7-1526-SM-6LLHO 20-29 years, female 30.2
GTEX-1PWST-1626-SM-EXOIU 70-79 years, male 29.8
GTEX-14PJ3-0326-SM-GPI94 50-59 years, male 29.3
GTEX-17F97-1626-SM-72D6W 50-59 years, male 28.8
GTEX-1KAFJ-1026-SM-D4P2Z 50-59 years, male 28.6
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 27.9
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 27.7
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 27.6
GTEX-WXYG-0126-SM-4OND7 50-59 years, female 27.4
GTEX-13111-0126-SM-5EGHO 50-59 years, male 27.3
GTEX-1R9K4-1526-SM-DPRY5 60-69 years, male 27.3
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 27.0
GTEX-14E1K-0126-SM-664NL 50-59 years, male 26.9
GTEX-1JMQK-1126-SM-CXZJW 60-69 years, male 26.9
GTEX-1HCU7-1426-SM-CNNQK 50-59 years, male 26.8
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 26.8
GTEX-17HII-2326-SM-GRR1X 50-59 years, male 26.5
GTEX-O5YV-0826-SM-HM8V9 60-69 years, female 26.4
GTEX-12WSD-1726-SM-5GCN4 60-69 years, female 26.3
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 26.3
GTEX-Y5V5-1126-SM-EVYAR 60-69 years, female 26.3
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 26.3
GTEX-1LSVX-1426-SM-DHXJO 60-69 years, male 26.0
GTEX-1PPH7-0126-SM-E6CPB 40-49 years, male 26.0
GTEX-14JG6-0226-SM-6872A 30-39 years, female 25.9
GTEX-ZDYS-1026-SM-4WKHC 50-59 years, male 25.8
GTEX-1LNCM-0426-SM-DHXK6 50-59 years, female 25.7
GTEX-X585-1826-SM-4QAS3 50-59 years, male 25.7
GTEX-Q734-0226-SM-48U1A 40-49 years, female 25.6
GTEX-14PN3-0226-SM-6871K 60-69 years, female 25.5
GTEX-1R7EU-2026-SM-E9U63 60-69 years, male 25.4
GTEX-1H1E6-0226-SM-GA8YV 30-39 years, male 25.3
GTEX-1J8Q3-0126-SM-C1YSI 60-69 years, male 25.3
GTEX-1JMLX-1426-SM-CNNPO 50-59 years, male 25.3
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 25.2
GTEX-15DYW-1426-SM-6LPIW 60-69 years, female 25.1
GTEX-1N2DV-0726-SM-HK7AD 40-49 years, male 25.1
GTEX-1PIIG-1226-SM-EXOIQ 30-39 years, male 25.1
GTEX-1NHNU-0226-SM-HK79X 50-59 years, male 25.0
GTEX-14ICL-0126-SM-664NG 30-39 years, male 24.9
GTEX-QMRM-0226-SM-CL55S 50-59 years, male 24.9
GTEX-WHWD-0126-SM-4M9Q5 50-59 years, male 24.9
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 24.8
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 24.8
GTEX-ZF29-0626-SM-4WKHD 60-69 years, female 24.8
GTEX-1HSMQ-0126-SM-D4P2I 50-59 years, male 24.7
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 24.7
GTEX-18A7A-1626-SM-HAV37 50-59 years, female 24.6
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 24.6
GTEX-1RMOY-0726-SM-EV79D 50-59 years, male 24.5
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 24.5
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 24.5
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 24.4
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 24.4
GTEX-PX3G-0926-SM-48U12 20-29 years, female 24.3
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 24.3
GTEX-15F5U-0126-SM-6LPKA 40-49 years, male 24.2
GTEX-17F9E-1126-SM-79OMO 50-59 years, male 24.2
GTEX-1F75I-0226-SM-7MKHQ 40-49 years, male 24.1
GTEX-1GZ4H-0126-SM-9JGGI 50-59 years, female 24.1
GTEX-1KANA-1226-SM-DHXKE 20-29 years, male 24.1
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 24.1
GTEX-16NFA-0226-SM-HAUYF 50-59 years, male 23.9
GTEX-1C475-1126-SM-7MGY7 40-49 years, female 23.9
GTEX-1K2DA-0126-SM-CGQGV 50-59 years, male 23.9
GTEX-1RAZA-1026-SM-E6CQ9 20-29 years, male 23.9
GTEX-1RAZR-1626-SM-EAZ4V 40-49 years, male 23.9
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 23.9
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 23.9
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 23.9
GTEX-1R9JW-0126-SM-EAZ4P 30-39 years, female 23.8
GTEX-15CHC-0726-SM-6AJ9D 60-69 years, female 23.7
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 23.7
GTEX-QDT8-1526-SM-EXOHP 30-39 years, female 23.7
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 23.7
GTEX-ZG7Y-2026-SM-DO91N 50-59 years, male 23.7
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 23.6
GTEX-14PJ4-0526-SM-6871G 60-69 years, male 23.6
GTEX-1CB4E-0126-SM-7DHMX 60-69 years, male 23.6
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 23.5
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 23.5
GTEX-14PJ5-0326-SM-664OD 60-69 years, female 23.5
GTEX-14PJO-2026-SM-GOQYV 60-69 years, male 23.5
GTEX-QV31-0126-SM-447BP 30-39 years, male 23.5
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 23.4
GTEX-1HCU9-0126-SM-9WG7M 20-29 years, male 23.4
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 23.4
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 23.3
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 23.3
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 23.3
GTEX-15RIF-0526-SM-6LLI2 20-29 years, male 23.3
GTEX-15SDE-0126-SM-793BA 50-59 years, female 23.3
GTEX-1AX9K-0226-SM-793CM 50-59 years, male 23.3
GTEX-1I1GT-0226-SM-GA8ZH 60-69 years, female 23.3
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 23.2
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 23.1
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 23.1
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 23.0
GTEX-1L5NE-0926-SM-D4P3P 50-59 years, male 23.0
GTEX-R55C-0126-SM-48FEQ 40-49 years, male 23.0
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 23.0
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 23.0
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 23.0
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 23.0
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 22.9
GTEX-17GQL-0126-SM-72D5Q 60-69 years, male 22.9
GTEX-17HHE-0326-SM-793BH 50-59 years, male 22.9
GTEX-1AYD5-0226-SM-79ONV 50-59 years, male 22.9
GTEX-1LSNM-0126-SM-EAZ57 50-59 years, male 22.9
GTEX-1S82Z-0126-SM-F2I21 30-39 years, female 22.9
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 22.9
GTEX-1N2EF-1526-SM-EXOIY 60-69 years, male 22.8
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 22.7
GTEX-ZLV1-0326-SM-HL9UA 60-69 years, female 22.7
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 22.6
GTEX-1NUQO-0426-SM-HK79G 20-29 years, female 22.6
GTEX-1IDJC-0126-SM-C1YQC 50-59 years, male 22.5
GTEX-1MCYP-0226-SM-EV7A3 20-29 years, female 22.5
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 22.5
GTEX-15RIG-0126-SM-6PAN4 40-49 years, male 22.4
GTEX-1MGNQ-1126-SM-EAZ4Y 40-49 years, male 22.4
GTEX-W5X1-0326-SM-HAUYG 40-49 years, female 22.4
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 22.3
GTEX-1MCC2-0826-SM-EV7AM 30-39 years, female 22.3
GTEX-15SHV-0126-SM-6LPIS 60-69 years, male 22.2
GTEX-169BO-0126-SM-79OLS 50-59 years, male 22.2
GTEX-1F5PK-0726-SM-7MGXN 50-59 years, male 22.2
GTEX-1R9PM-0126-SM-DPRY6 20-29 years, male 22.2
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 22.2
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 22.2
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 22.2
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 22.1
GTEX-1H3O1-1126-SM-9WPO9 60-69 years, male 22.1
GTEX-WYVS-0126-SM-4ONDH 40-49 years, female 22.1
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 22.1
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 22.0
GTEX-1LVAN-1026-SM-CNNQZ 50-59 years, female 22.0
GTEX-1QAET-2326-SM-EXOJ1 50-59 years, male 22.0
GTEX-O5YW-0926-SM-HK7A1 50-59 years, male 22.0
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 21.9
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 21.9
GTEX-18A67-1526-SM-7LG6F 50-59 years, male 21.9
GTEX-P4PQ-0926-SM-E9U4D 60-69 years, male 21.9
GTEX-WYJK-0726-SM-G8W7Z 50-59 years, male 21.9
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 21.8
GTEX-14BMU-0426-SM-5P9FI 20-29 years, female 21.8
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 21.6
GTEX-1CB4I-1426-SM-79OLZ 50-59 years, male 21.6
GTEX-1J8QM-0926-SM-C1YQ9 60-69 years, female 21.6
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 21.5
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 21.5
GTEX-15UF7-1926-SM-6LPJT 40-49 years, male 21.5
GTEX-1QMI2-1526-SM-EXOJT 60-69 years, male 21.5
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 21.5
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 21.5
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 21.4
GTEX-17F98-0126-SM-7MGW3 40-49 years, female 21.4
GTEX-1JK1U-0126-SM-C1YQY 60-69 years, male 21.3
GTEX-1QP29-0126-SM-EAZ3S 50-59 years, male 21.3
GTEX-1S831-0726-SM-EV79O 20-29 years, male 21.3
GTEX-QCQG-0226-SM-48U28 50-59 years, female 21.3
GTEX-ZF2S-0326-SM-4WKGD 50-59 years, female 21.3
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 21.2
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 21.2
GTEX-1MJK3-0126-SM-DPRYY 20-29 years, male 21.2
GTEX-1MUQO-1326-SM-EV7AE 60-69 years, male 21.2
GTEX-1QCLZ-1026-SM-E6CR1 60-69 years, female 21.2
GTEX-NFK9-1426-SM-43ISG 40-49 years, male 21.2
GTEX-ZEX8-0726-SM-4WKH8 50-59 years, male 21.2
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 21.1
GTEX-1LGRB-0126-SM-CNNR6 50-59 years, female 21.1
GTEX-QLQW-0126-SM-447BK 30-39 years, male 21.1
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 21.1
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 21.1
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 21.1
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 21.0
GTEX-14PJ6-0226-SM-6AJ9K 60-69 years, female 21.0
GTEX-15DZA-0126-SM-6PAMV 30-39 years, female 21.0
GTEX-16AAH-0126-SM-HAV23 50-59 years, male 21.0
GTEX-1AMFI-0926-SM-731E4 50-59 years, female 21.0
GTEX-ZPCL-0626-SM-DNZZ6 60-69 years, female 21.0
GTEX-1QP2A-2526-SM-EXOJB 50-59 years, male 20.9
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 20.9
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 20.8
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 20.8
GTEX-144GN-2126-SM-5O99D 50-59 years, male 20.8
GTEX-1B97J-1926-SM-7IGQB 50-59 years, female 20.7
GTEX-1S82P-1326-SM-HL9SA 60-69 years, female 20.7
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 20.6
GTEX-15DCE-0126-SM-HAV2T 20-29 years, male 20.6
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 20.6
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 20.6
GTEX-ZTPG-2126-SM-H6Q6N 20-29 years, female 20.6
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 20.5
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 20.5
GTEX-15SB6-0126-SM-6LPJR 50-59 years, female 20.5
GTEX-1JKYN-0326-SM-AHZ4D 30-39 years, male 20.5
GTEX-1JKYR-1126-SM-CGQGJ 20-29 years, male 20.5
GTEX-R55G-0226-SM-48FEI 40-49 years, female 20.5
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 20.4
GTEX-15RJ7-0126-SM-6LPJN 40-49 years, male 20.4
GTEX-1LG7Z-0126-SM-EV79V 30-39 years, male 20.4
GTEX-1RB15-0126-SM-G9ERT 60-69 years, male 20.4
GTEX-OIZF-0926-SM-7MKH7 60-69 years, male 20.4
GTEX-1PDJ9-0226-SM-DPRYX 20-29 years, male 20.3
GTEX-1RNTQ-1026-SM-EV7B4 20-29 years, female 20.3
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 20.2
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 20.2
GTEX-1IDJU-0426-SM-GA8YH 60-69 years, female 20.2
GTEX-1PPH8-1126-SM-HL9SW 20-29 years, male 20.2
GTEX-WY7C-0126-SM-4ONCO 50-59 years, male 20.2
GTEX-XYKS-0126-SM-HL9TA 60-69 years, female 20.2
GTEX-15ETS-3126-SM-6LPKN 40-49 years, female 20.1
GTEX-18A6Q-2126-SM-HAV3C 60-69 years, male 20.1
GTEX-1C4CL-0626-SM-731DM 30-39 years, male 20.1
GTEX-1FIGZ-0126-SM-7MKGZ 40-49 years, male 20.1
GTEX-1H3VY-1526-SM-9WG7S 50-59 years, male 20.1
GTEX-OHPL-0926-SM-G9ER4 60-69 years, female 20.1
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 20.1
GTEX-ZPIC-0126-SM-DNZZ9 40-49 years, female 20.1
GTEX-1M5QR-0126-SM-F2I23 40-49 years, male 20.0
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 20.0
GTEX-16XZY-0126-SM-7IGQ9 70-79 years, male 19.9
GTEX-1A3MV-0126-SM-731FQ 30-39 years, male 19.9
GTEX-1B97I-0126-SM-731DH 40-49 years, male 19.9
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 19.9
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 19.8
GTEX-QV44-0126-SM-CJI1X 50-59 years, male 19.8
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 19.8
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 19.7
GTEX-1C64O-1626-SM-731EN 60-69 years, male 19.6
GTEX-ZTTD-1726-SM-57WEL 50-59 years, male 19.6
GTEX-P4QT-0926-SM-EZ6KQ 50-59 years, female 19.4
GTEX-1B8KZ-0226-SM-7EWF6 50-59 years, male 19.2
GTEX-1CB4F-0226-SM-7EPHS 60-69 years, male 19.2
GTEX-14PKU-0526-SM-6871A 40-49 years, female 19.1
GTEX-P78B-1226-SM-EZ6KP 40-49 years, female 19.1
GTEX-15G1A-0226-SM-H7OFT 30-39 years, male 19.0
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 18.9
GTEX-1IDJD-0726-SM-GA916 30-39 years, male 18.9
GTEX-13OVK-0426-SM-7KFT8 40-49 years, male 18.8
GTEX-1RAZQ-0126-SM-EV7B1 30-39 years, male 18.8
GTEX-1IDJF-1526-SM-GA8ZR 20-29 years, male 18.7
GTEX-14XAO-0126-SM-HAV2B 60-69 years, female 18.4
GTEX-1IDJE-0126-SM-C1YQ6 50-59 years, female 18.4
GTEX-1MJIX-0126-SM-HL9SS 40-49 years, male 18.3
GTEX-1QW4Y-0126-SM-DPRZQ 30-39 years, male 18.3
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 18.3
GTEX-15RIE-1626-SM-HAUZ7 60-69 years, male 18.2
GTEX-1QCLY-0126-SM-DPRZV 30-39 years, male 18.2
GTEX-18D9B-0126-SM-HAV21 60-69 years, male 18.0
GTEX-1QP66-0126-SM-EAZ3N 50-59 years, male 18.0
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 17.9
GTEX-1GF9U-0126-SM-AHZ4G 40-49 years, female 17.8
GTEX-1KXAM-0126-SM-HL9S2 60-69 years, male 17.7
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 17.6
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 17.5
GTEX-16A39-0126-SM-H7OFU 30-39 years, female 17.2
GTEX-18A66-1826-SM-7KFSU 60-69 years, male 17.2
GTEX-1F5PL-2226-SM-7MKHE 40-49 years, female 17.1
GTEX-QESD-0126-SM-EXOHG 20-29 years, male 16.9
GTEX-1R7EV-0126-SM-EAZ3O 40-49 years, male 16.8
GTEX-1OFPY-0126-SM-EXOJ3 60-69 years, male 16.7
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 16.4
GTEX-111CU-0426-SM-5GZY1 50-59 years, male 16.3
GTEX-1R9K5-1126-SM-EAZ4G 50-59 years, male 16.2
GTEX-S4Q7-0126-SM-4AD5P 20-29 years, male 13.4
Show allShow less

SPLEEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spleen
Scaled Tags Per Million: 23.5
FF:10025-101D7 39,50,70 years, male 23.5

SPLEEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.4
Macaque sample Sample description nTPM
Spleen
nTPM: 18.4
Samples: 3

Max nTPM: 19.3
Min nTPM: 17.6
Sample A 18.4
Sample B 17.6
Sample D 19.3

SPLEEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.9
Pig sample Sample description nTPM
Spleen
nTPM: 36.9
Samples: 4

Max nTPM: 55.3
Min nTPM: 28.4
Sample A Female 28.4
Sample B Female 55.3
Sample C Male 31.0
Sample D Male 33.1

SPLEEN - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.7
Mouse sample Sample description nTPM
Spleen
nTPM: 13.7
Samples: 4

Max nTPM: 20.6
Min nTPM: 8.5
Sample C 20.6
Sample D 8.5
Sample A 9.2
Sample B 16.5

SPLEEN - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.8
Rat sample Sample description nTPM
Spleen
nTPM: 36.8
Samples: 4

Max nTPM: 38.8
Min nTPM: 34.3
Sample A 36.8
Sample A 37.3
Sample A 38.8
Sample A 34.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.