PSAP
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PSAP
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:1279.2 nTPM
GTEx:740.1 nTPM
FANTOM5:1372.7 Scaled Tags Per Million
Macaque:322.8 nTPM
Pig:525.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1279.2
Sample id Sample description nTPM
Putamen
nTPM: 1279.2
2466 Female, age 79, unknown 1497.1
1937 Female, age 91, right hemisphere 1484.0
2482 Female, age 94, left hemisphere 1445.8
1838 Male, age 80, right hemisphere 1429.6
1829 Male, age 74, unknown 1315.4
2489 Female, age 72, unknown 980.5
2647 Male, age 75, left hemisphere 801.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

740.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 740.1
Samples: 254

Max nTPM: 1223.7
Min nTPM: 366.0
Std nTPM: 162.6
Median nTPM: 728.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1223.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1217.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1165.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1161.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1155.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1142.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1108.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1101.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1101.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1096.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1063.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1059.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1007.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1007.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1004.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1002.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1001.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 995.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 987.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 978.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 975.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 969.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 966.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 951.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 937.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 930.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 930.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 926.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 917.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 917.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 907.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 906.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 903.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 900.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 899.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 893.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 893.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 893.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 892.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 889.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 889.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 884.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 884.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 880.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 877.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 877.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 874.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 870.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 866.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 863.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 862.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 860.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 860.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 858.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 857.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 853.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 853.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 852.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 851.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 851.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 848.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 848.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 847.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 842.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 841.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 839.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 839.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 839.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 837.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 836.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 836.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 832.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 829.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 828.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 826.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 825.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 825.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 823.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 823.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 821.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 819.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 815.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 810.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 810.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 805.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 805.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 805.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 801.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 799.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 798.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 793.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 788.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 787.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 786.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 785.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 785.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 784.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 777.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 777.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 777.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 777.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 776.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 775.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 773.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 771.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 771.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 771.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 766.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 766.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 766.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 765.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 760.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 758.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 755.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 754.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 753.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 752.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 751.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 749.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 745.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 743.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 741.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 738.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 734.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 730.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 729.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 728.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 727.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 727.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 726.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 724.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 723.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 723.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 721.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 720.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 720.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 718.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 716.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 713.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 711.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 710.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 707.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 705.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 703.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 700.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 699.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 697.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 693.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 692.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 692.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 690.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 690.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 684.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 683.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 682.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 681.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 680.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 678.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 675.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 675.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 674.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 673.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 672.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 671.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 670.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 670.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 670.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 669.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 666.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 666.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 665.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 664.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 662.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 662.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 662.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 661.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 659.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 658.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 657.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 655.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 648.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 648.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 648.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 644.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 642.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 641.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 641.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 641.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 640.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 639.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 638.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 628.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 626.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 625.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 624.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 624.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 621.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 619.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 616.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 615.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 614.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 610.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 608.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 608.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 602.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 600.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 599.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 597.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 594.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 594.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 589.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 581.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 581.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 580.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 574.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 573.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 570.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 569.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 565.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 563.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 562.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 558.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 557.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 551.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 545.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 545.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 544.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 542.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 542.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 534.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 533.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 526.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 524.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 501.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 495.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 494.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 489.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 485.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 482.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 480.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 479.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 479.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 465.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 464.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 459.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 450.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 448.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 441.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 436.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 435.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 423.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 418.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 410.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 366.0
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1372.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1372.7
FF:10176-103C5 60 years, female 1372.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

322.8
Macaque sample Sample description nTPM
Putamen
nTPM: 322.8
Samples: 2

Max nTPM: 337.3
Min nTPM: 308.3
Sample A 308.3
Sample B 337.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

525.9
Pig sample Sample description nTPM
Putamen
nTPM: 525.9
Samples: 3

Max nTPM: 645.3
Min nTPM: 391.7
Sample B Female 391.7
Sample C Male 645.3
Sample D Male 540.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.