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RPL37A
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL37A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:1866.1 nTPM
FANTOM5:415.5 Scaled Tags Per Million
Pig:0.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA065327
Glial cells Not detected
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1866.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1866.1
Samples: 300

Max nTPM: 5322.9
Min nTPM: 548.6
Std nTPM: 590.2
Median nTPM: 1760.9
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 5322.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 4459.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 4333.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4020.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3889.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 3665.8
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 3544.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 3523.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3363.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 3316.5
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 3195.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3168.9
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 3121.5
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 3046.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2981.5
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 2937.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 2886.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2850.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2772.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2745.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2663.6
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 2656.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2651.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2625.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2549.1
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 2526.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 2522.7
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 2522.2
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 2521.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2486.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 2455.6
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 2454.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2433.7
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 2407.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2400.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2374.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2370.1
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 2363.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2340.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2335.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 2331.1
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 2323.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 2317.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 2301.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2291.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 2285.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2285.7
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 2269.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 2265.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 2257.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 2253.5
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 2250.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2247.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2246.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2246.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 2236.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 2233.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 2227.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 2219.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2218.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 2189.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2188.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 2187.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 2177.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 2170.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 2155.8
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 2155.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 2153.7
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 2152.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2142.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2141.9
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 2140.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 2136.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 2125.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 2112.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2110.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 2101.5
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 2097.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2093.0
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 2079.5
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 2074.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2073.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2070.4
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 2070.0
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 2057.4
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 2055.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2052.9
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 2045.3
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 2042.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 2034.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 2034.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 2031.0
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 2020.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2015.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2013.0
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 1998.7
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 1995.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1993.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1993.6
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 1989.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1984.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1980.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1973.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1958.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1955.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1947.5
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 1944.1
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 1940.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1939.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1934.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1929.4
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 1928.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1917.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1914.0
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 1907.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1902.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1901.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1899.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1889.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1889.1
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 1876.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1872.6
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 1851.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1849.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1847.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1845.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1844.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1833.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1832.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1824.5
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 1823.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1815.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1815.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1813.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1802.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1801.8
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 1795.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1786.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1785.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1784.5
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 1784.3
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 1782.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1778.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1774.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1773.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1771.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1764.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1762.4
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 1762.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1761.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1760.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1759.0
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 1758.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1745.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1745.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1744.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1738.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1736.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1735.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1735.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1730.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1729.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1726.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1725.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1725.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 1724.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1722.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1717.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1708.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1707.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1704.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1699.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1694.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1684.1
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 1679.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1675.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1672.3
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 1672.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1671.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1667.8
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 1662.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1661.4
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 1656.9
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 1656.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1655.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1654.5
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 1653.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1651.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1646.8
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 1644.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1639.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1636.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1632.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1631.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1631.5
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 1629.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1626.1
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 1622.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1613.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1612.9
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 1611.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1606.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1605.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1602.9
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 1601.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1597.5
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 1595.1
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 1594.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1593.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1587.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1584.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1577.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1576.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1576.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1558.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1558.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1556.9
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 1553.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1552.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1546.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1539.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1532.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1528.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1519.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1503.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1494.7
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 1486.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1479.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1478.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1478.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1477.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1453.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1446.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1444.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1443.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1441.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1438.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1423.9
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 1420.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1417.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1416.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1415.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1414.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1403.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1395.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1393.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1389.8
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 1387.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1384.0
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 1365.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 1364.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1357.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1350.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1348.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1345.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1338.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1338.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1330.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1325.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1324.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1319.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1316.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 1302.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1300.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1300.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1299.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1292.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1285.2
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 1281.2
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 1281.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1277.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1277.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1265.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1264.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1260.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1253.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1246.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1227.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1205.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1198.1
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 1190.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1189.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1184.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1175.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1170.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1146.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1131.9
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 1125.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1117.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1106.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1105.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1101.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1096.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1079.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1072.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1026.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 948.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 813.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 810.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 548.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

415.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 415.5
FF:10164-103B2 76 years, female 415.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Caudate
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

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