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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Ventrolateral medulla, A1-C1 cell groups nTPM: 19738.7
2302
Female, age 91, both hemispheres
32399.1
2180
Male, age 61, both hemispheres
21161.0
2118
Male, age 80, both hemispheres
17797.6
1986
Male, age 76, both hemispheres
15348.3
2741
Female, age 85, both hemispheres
11987.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 30185.9
2456
Female, age 91, both hemispheres
39376.6
2840
Female, age 85, both hemispheres
38193.2
2359
Male, age 61, both hemispheres
36240.5
2161
Male, age 80, both hemispheres
31016.1
2449
Male, age 74, both hemispheres
20091.6
1959
Male, age 76, both hemispheres
16197.5
PONS AND MEDULLA - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
6888.0
Pig sample
Sample description
nTPM
Medulla oblongata nTPM: 5556.7
Samples: 4
Max nTPM: 8367.7
Min nTPM: 3334.4
Sample A
Female
8367.7
Sample B
Female
5233.7
Sample C
Male
5290.8
Sample D
Male
3334.4
Pons nTPM: 6888.1
Samples: 4
Max nTPM: 9393.6
Min nTPM: 4880.3
Sample A
Female
9393.6
Sample B
Female
4880.3
Sample C
Male
5993.1
Sample D
Male
7285.2
PONS AND MEDULLA - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.