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RPL10A
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL10A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:432.5 nTPM
FANTOM5:18.7 Scaled Tags Per Million
Pig:266.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA053803
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

432.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 432.5
Samples: 300

Max nTPM: 1067.9
Min nTPM: 220.6
Std nTPM: 125.0
Median nTPM: 408.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1067.9
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 1005.6
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 915.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 868.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 862.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 817.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 813.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 785.8
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 773.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 767.6
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 716.9
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 696.2
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 687.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 687.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 685.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 683.4
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 674.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 673.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 672.1
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 671.6
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 668.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 662.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 613.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 607.3
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 600.1
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 599.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 596.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 590.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 589.7
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 576.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 563.1
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 562.9
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 561.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 558.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 547.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 543.9
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 541.9
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 540.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 537.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 532.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 526.7
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 526.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 524.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 523.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 522.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 521.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 520.3
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 520.2
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 519.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 519.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 517.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 514.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 513.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 512.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 511.0
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 507.8
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 504.4
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 501.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 498.9
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 492.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 492.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 491.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 490.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 490.7
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 490.4
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 489.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 488.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 487.8
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 484.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 483.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 481.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 480.9
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 479.7
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 478.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 477.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 476.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 476.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 475.6
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 472.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 472.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 471.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 470.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 470.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 468.4
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 467.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 467.4
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 465.5
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 461.3
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 460.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 459.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 459.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 459.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 458.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 458.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 457.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 456.9
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 455.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 455.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 452.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 451.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 450.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 449.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 449.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 448.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 445.3
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 444.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 444.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 442.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 442.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 442.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 441.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 441.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 440.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 439.2
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 438.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 438.5
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 438.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 438.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 437.4
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 436.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 436.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 433.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 433.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 432.7
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 432.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 431.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 431.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 431.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 431.0
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 430.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 427.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 427.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 424.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 423.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 421.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 421.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 420.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 420.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 419.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 419.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 418.9
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 418.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 418.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 416.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 415.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 415.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 414.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 413.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 411.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 410.2
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 407.3
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 406.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 405.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 405.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 404.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 402.9
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 402.3
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 402.2
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 401.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 400.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 399.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 399.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 399.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 398.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 397.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 397.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 397.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 397.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 396.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 395.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 395.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 395.0
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 393.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 393.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 392.7
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 391.9
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 389.8
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 389.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 389.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 388.4
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 388.0
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 387.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 385.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 383.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 383.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 382.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 381.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 380.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 380.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 380.2
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 378.9
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 377.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 376.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 375.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 374.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 374.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 372.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 371.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 370.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 369.2
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 368.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 368.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 366.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 366.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 365.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 364.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 363.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 362.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 362.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 361.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 361.8
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 361.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 360.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 359.6
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 358.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 358.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 357.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 357.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 357.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 356.3
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 354.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 354.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 352.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 352.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 351.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 350.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 348.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 348.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 347.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 344.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 344.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 343.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 342.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 342.6
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 341.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 340.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 339.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 339.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 339.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 338.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 337.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 337.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 334.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 334.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 332.6
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 332.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 332.1
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 330.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 330.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 328.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 328.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 327.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 327.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 327.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 327.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 326.8
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 326.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 325.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 325.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 323.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 319.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 319.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 319.0
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 318.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 316.8
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 316.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 316.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 315.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 314.5
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 311.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 310.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 309.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 308.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 307.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 307.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 303.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 300.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 297.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 295.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 294.3
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 294.1
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 293.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 292.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 292.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 290.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 287.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 285.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 278.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 278.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 277.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 276.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 275.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 274.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 268.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 264.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 258.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 249.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 238.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 226.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 220.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

18.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 18.7
FF:10164-103B2 76 years, female 18.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

266.9
Pig sample Sample description nTPM
Caudate
nTPM: 267.0
Samples: 4

Max nTPM: 317.2
Min nTPM: 214.8
Sample A Female 254.0
Sample B Female 317.2
Sample C Male 281.8
Sample D Male 214.8

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