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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SREBF2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:49.8 nTPM
HPA Brain:151.7 nTPM
GTEx:49.8 nTPM
Pig:104.5 nTPM
Mouse:68.3 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 147.4
2226 Male, age 75, left hemisphere 155.8
1961 Female, age 42, unknown 139.0
Dorsomedial nucleus
nTPM: 138.8
1989 Male, age 62, unknown 169.3
2017 Female, age 42, unknown 133.5
2041 Female, age 72, unknown 113.7
Lateral hypothalamic area
nTPM: 136.1
2271 Male, age 75, both hemispheres 149.6
1791 Male, age 80, right hemisphere 145.9
2412 Male, age 62, unknown 124.7
2228 Male, age 66, unknown 124.0
Mammillary body
nTPM: 112.2
2413 Male, age 66, unknown 130.1
1923 Female, age 72, unknown 127.7
1834 Female, age 42, unknown 107.0
1948 Female, age 72, unknown 104.5
1945 Male, age 80, right hemisphere 91.8
Paraventricular nucleus
nTPM: 105.3
2700 Male, age 62, unknown 105.3
Preoptic area
nTPM: 124.0
1907 Male, age 80, right hemisphere 144.2
1861 Female, age 42, unknown 117.7
2414 Female, age 72, unknown 110.1
Supraoptic nucleus
nTPM: 102.2
2835 Female, age 72, unknown 120.4
1894 Female, age 72, unknown 93.6
2043 Male, age 62, unknown 92.5
Ventromedial nucleus
nTPM: 151.7
1982 Female, age 72, unknown 162.7
1822 Female, age 42, unknown 140.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 49.8
Samples: 257

Max nTPM: 99.8
Min nTPM: 7.8
Std nTPM: 16.4
Median nTPM: 49.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 99.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 91.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 91.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 85.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 85.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 82.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 82.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 81.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 80.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 80.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 79.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 77.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 76.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 76.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 75.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 75.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 75.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 75.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 74.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 74.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 74.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 73.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 73.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 72.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 71.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 71.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 70.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 70.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 69.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 69.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 68.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 68.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 68.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 68.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 67.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 67.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 67.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 67.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 67.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 67.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 67.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 66.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 66.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 66.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 66.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 66.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 64.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 64.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 64.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 64.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 64.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 63.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 63.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 62.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 62.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 62.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 62.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 62.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 62.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 61.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 61.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 61.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 61.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 61.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 61.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 61.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 61.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 61.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 60.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 59.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 59.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 59.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 59.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 58.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 58.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 58.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 58.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 58.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 58.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 58.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 57.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 57.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 56.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 56.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 56.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 56.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 56.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 55.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 55.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 55.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 55.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 55.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 55.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 55.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 55.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 54.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 54.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 54.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 54.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 54.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 53.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 53.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 53.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 53.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 53.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 53.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 53.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 53.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 52.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 52.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 52.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 52.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 52.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 52.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 51.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 51.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 51.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 51.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 51.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 50.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 50.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 50.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 50.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 50.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 49.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 49.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 49.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 49.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 49.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 49.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 49.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 49.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 48.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 48.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 48.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 48.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 48.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 48.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 48.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 48.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 48.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 48.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 47.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 47.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 47.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 46.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 46.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 46.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 46.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 46.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 45.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 45.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 45.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 44.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 44.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 43.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 43.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 43.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 43.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 43.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 42.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 42.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 42.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 41.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 41.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 41.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 41.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 40.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 39.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 39.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 39.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 39.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 39.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 39.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 39.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 39.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 39.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 39.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 38.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 38.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 38.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 37.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 37.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 37.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 37.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 37.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 37.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 36.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 36.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 36.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 35.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 35.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 35.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 35.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 35.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 34.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 34.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 34.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 34.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 33.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 33.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 33.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 33.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 33.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 32.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 32.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 32.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 32.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 31.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 31.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 31.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 31.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 30.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 30.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 30.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 30.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 29.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 29.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 29.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 28.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 28.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 28.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 27.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 27.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 27.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 27.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 25.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 25.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 24.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 24.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 23.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 23.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 22.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 22.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 21.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 21.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 19.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 19.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 15.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 14.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 13.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 7.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 104.6
Samples: 4

Max nTPM: 126.3
Min nTPM: 81.4
Sample A Female 126.3
Sample B Female 107.7
Sample C Male 102.8
Sample D Male 81.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 68.3
Samples: 4

Max nTPM: 78.4
Min nTPM: 61.0
Sample A Male 70.7
Sample B Male 78.4
Sample C Female 61.0
Sample D Female 63.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.1
70439177 Antisense, RP_050614_03_D01, Mouse strain C57BL/6J (56 days, male) 1.1

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