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  • PFDN6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:109.5 nTPM
HPA Brain:9.7 nTPM
GTEx:109.5 nTPM
Pig:61.2 nTPM
Mouse:95.5 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 8.3
2226 Male, age 75, left hemisphere 9.9
1961 Female, age 42, unknown 6.8
Dorsomedial nucleus
nTPM: 7.8
1989 Male, age 62, unknown 9.2
2041 Female, age 72, unknown 8.5
2017 Female, age 42, unknown 5.8
Lateral hypothalamic area
nTPM: 9.7
2271 Male, age 75, both hemispheres 11.2
2228 Male, age 66, unknown 9.8
1791 Male, age 80, right hemisphere 9.5
2412 Male, age 62, unknown 8.3
Mammillary body
nTPM: 9.1
1923 Female, age 72, unknown 11.0
2413 Male, age 66, unknown 10.1
1948 Female, age 72, unknown 8.8
1834 Female, age 42, unknown 7.9
1945 Male, age 80, right hemisphere 7.7
Paraventricular nucleus
nTPM: 9.1
2700 Male, age 62, unknown 9.1
Preoptic area
nTPM: 9.7
1861 Female, age 42, unknown 10.7
1907 Male, age 80, right hemisphere 9.4
2414 Female, age 72, unknown 9.0
Supraoptic nucleus
nTPM: 8.4
2835 Female, age 72, unknown 9.6
1894 Female, age 72, unknown 8.3
2043 Male, age 62, unknown 7.4
Ventromedial nucleus
nTPM: 7.4
1982 Female, age 72, unknown 8.7
1822 Female, age 42, unknown 6.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 109.5
Samples: 257

Max nTPM: 240.4
Min nTPM: 32.3
Std nTPM: 27.3
Median nTPM: 105.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 240.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 206.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 196.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 191.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 182.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 175.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 172.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 169.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 168.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 167.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 165.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 163.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 162.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 161.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 158.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 157.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 156.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 153.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 151.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 151.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 149.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 148.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 144.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 143.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 142.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 142.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 142.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 139.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 138.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 138.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 137.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 137.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 137.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 136.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 135.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 134.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 133.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 133.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 132.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 132.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 132.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 131.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 130.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 129.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 129.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 128.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 128.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 127.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 126.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 126.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 126.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 126.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 126.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 126.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 124.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 123.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 123.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 123.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 123.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 123.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 123.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 122.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 122.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 122.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 121.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 121.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 121.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 121.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 121.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 121.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 121.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 121.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 120.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 120.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 120.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 120.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 120.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 119.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 119.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 118.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 118.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 118.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 118.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 118.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 117.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 116.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 116.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 116.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 116.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 116.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 116.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 115.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 115.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 115.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 115.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 115.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 115.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 114.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 114.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 114.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 114.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 113.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 113.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 113.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 113.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 113.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 113.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 113.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 112.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 112.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 112.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 111.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 111.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 110.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 110.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 110.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 110.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 109.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 109.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 108.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 106.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 106.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 106.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 106.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 105.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 105.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 105.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 105.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 104.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 104.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 104.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 104.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 104.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 104.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 103.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 103.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 103.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 103.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 103.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 102.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 102.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 102.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 102.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 102.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 102.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 101.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 101.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 100.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 100.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 100.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 100.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 99.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 99.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 99.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 98.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 97.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 97.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 97.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 97.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 97.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 97.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 97.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 97.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 97.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 97.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 97.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 97.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 96.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 96.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 96.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 96.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 96.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 96.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 96.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 96.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 96.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 95.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 95.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 95.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 95.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 95.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 95.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 94.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 94.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 94.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 94.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 93.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 93.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 92.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 92.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 92.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 92.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 91.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 91.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 91.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 91.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 91.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 91.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 91.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 91.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 90.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 90.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 90.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 89.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 89.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 89.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 89.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 87.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 87.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 86.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 86.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 85.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 85.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 85.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 85.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 84.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 84.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 84.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 84.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 83.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 83.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 83.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 83.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 83.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 83.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 82.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 82.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 82.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 81.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 81.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 81.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 80.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 80.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 80.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 80.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 79.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 79.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 79.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 76.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 76.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 75.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 74.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 73.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 72.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 71.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 71.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 69.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 68.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 67.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 56.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 54.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 50.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 32.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 61.2
Samples: 4

Max nTPM: 80.9
Min nTPM: 44.2
Sample A Female 80.9
Sample B Female 61.0
Sample C Male 58.8
Sample D Male 44.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 95.5
Samples: 4

Max nTPM: 105.9
Min nTPM: 89.3
Sample A Male 92.1
Sample B Male 105.9
Sample C Female 89.3
Sample D Female 94.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
68196924 Antisense, RP_041116_01_E12, Mouse strain C57BL/6J (56 days, male) 0.5

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