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  • TISSUE

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  • SMIM11
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:22.9 nTPM
HPA Brain:24.0 nTPM
GTEx:22.9 nTPM
Pig:5.5 nTPM
Mouse:51.9 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 23.4
2226 Male, age 75, left hemisphere 25.2
1961 Female, age 42, unknown 21.6
Dorsomedial nucleus
nTPM: 23.3
2041 Female, age 72, unknown 25.0
1989 Male, age 62, unknown 23.6
2017 Female, age 42, unknown 21.3
Lateral hypothalamic area
nTPM: 21.2
1791 Male, age 80, right hemisphere 23.0
2271 Male, age 75, both hemispheres 22.9
2228 Male, age 66, unknown 20.9
2412 Male, age 62, unknown 18.1
Mammillary body
nTPM: 24.0
1923 Female, age 72, unknown 27.3
1948 Female, age 72, unknown 24.4
1834 Female, age 42, unknown 23.3
1945 Male, age 80, right hemisphere 22.7
2413 Male, age 66, unknown 22.2
Paraventricular nucleus
nTPM: 20.2
2700 Male, age 62, unknown 20.2
Preoptic area
nTPM: 22.5
1907 Male, age 80, right hemisphere 24.7
2414 Female, age 72, unknown 22.0
1861 Female, age 42, unknown 20.8
Supraoptic nucleus
nTPM: 23.2
2043 Male, age 62, unknown 25.8
1894 Female, age 72, unknown 23.5
2835 Female, age 72, unknown 20.2
Ventromedial nucleus
nTPM: 22.1
1982 Female, age 72, unknown 23.4
1822 Female, age 42, unknown 20.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 22.9
Samples: 257

Max nTPM: 67.5
Min nTPM: 4.8
Std nTPM: 7.4
Median nTPM: 22.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 67.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 57.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 49.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 43.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 43.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 42.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 40.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 36.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 34.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 34.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 32.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 32.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 31.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 31.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 31.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 31.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 30.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 30.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 30.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 30.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 29.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 29.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 29.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 29.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 29.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 29.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 28.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 28.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 28.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 28.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 28.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 28.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 28.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 28.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 28.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 27.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 27.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 27.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 26.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 26.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 26.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 26.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 26.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 26.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 26.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 26.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 26.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 26.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 26.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 26.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 26.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 26.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 26.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 25.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 25.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 25.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 25.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 25.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 25.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 25.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 25.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 25.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 25.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 25.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 25.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 25.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 25.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 25.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 25.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 25.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 25.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 24.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 24.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 24.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 24.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 24.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 24.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 24.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 24.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 24.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 24.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 24.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 24.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 23.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 23.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 23.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 23.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 23.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 23.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 23.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 23.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 23.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 23.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 23.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 23.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 23.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 22.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 22.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 22.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 22.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 22.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 22.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 22.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 22.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 22.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 22.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 22.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 22.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 22.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 21.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 21.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 21.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 21.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 21.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 21.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 21.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 21.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 21.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 21.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 21.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 21.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 21.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 21.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 21.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 21.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 21.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 21.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 21.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 21.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 21.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 21.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 21.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 20.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 20.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 20.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 20.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 20.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 20.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 20.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 20.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 20.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 20.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 20.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 20.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 20.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 19.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 19.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 19.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 19.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 19.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 19.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 19.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 19.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 19.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 19.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 19.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 19.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 19.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 19.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 18.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 18.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 18.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 18.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 18.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 18.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 18.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 18.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 18.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 18.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 18.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 18.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 18.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 18.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 17.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 17.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 17.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 17.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 17.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 17.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 17.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 17.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 17.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 17.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 17.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 17.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 17.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 17.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 17.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 17.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 17.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 17.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 17.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 16.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 16.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 16.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 16.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 16.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 16.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 15.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 15.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 15.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 15.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 15.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 15.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 15.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 15.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 15.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 15.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 15.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 15.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 15.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 14.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 14.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 14.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 14.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 14.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 14.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 13.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 13.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 13.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 13.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 13.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 12.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 11.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 11.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 10.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 9.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 9.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 6.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 4.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 5.5
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.8
Sample A Female 6.6
Sample B Female 5.6
Sample C Male 5.1
Sample D Male 4.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 52.0
Samples: 4

Max nTPM: 55.8
Min nTPM: 44.9
Sample A Male 53.3
Sample B Male 55.8
Sample C Female 53.8
Sample D Female 44.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
633288 Antisense, RP_040907_02_E04, Mouse strain C57BL/6J (56 days, male) 0.1

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