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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • EVOLUTION

  • CLIC1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:15.7 nTPM
GTEx:42.9 nTPM
FANTOM5:25.3 Scaled Tags Per Million
Pig:5.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.7
Sample id Sample description nTPM
Putamen
nTPM: 15.7
2482 Female, age 94, left hemisphere 27.2
2489 Female, age 72, unknown 22.2
1937 Female, age 91, right hemisphere 13.8
1838 Male, age 80, right hemisphere 13.4
2466 Female, age 79, unknown 12.7
2647 Male, age 75, left hemisphere 10.6
1829 Male, age 74, unknown 9.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 42.9
Samples: 254

Max nTPM: 254.9
Min nTPM: 8.1
Std nTPM: 31.4
Median nTPM: 33.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 254.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 188.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 155.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 155.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 147.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 146.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 131.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 117.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 114.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 107.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 102.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 98.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 97.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 94.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 93.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 93.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 92.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 88.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 88.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 88.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 86.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 85.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 83.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 83.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 83.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 80.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 75.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 75.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 72.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 72.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 72.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 71.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 70.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 70.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 69.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 69.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 68.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 67.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 65.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 64.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 63.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 63.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 62.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 62.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 61.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 60.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 59.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 58.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 58.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 58.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 58.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 57.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 57.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 56.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 56.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 56.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 56.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 56.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 55.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 55.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 55.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 55.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 54.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 54.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 53.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 53.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 52.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 50.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 50.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 50.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 49.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 48.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 48.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 48.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 48.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 47.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 46.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 46.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 45.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 45.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 44.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 44.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 44.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 44.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 44.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 43.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 43.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 42.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 42.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 42.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 42.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 41.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 41.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 40.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 40.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 40.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 39.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 39.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 38.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 37.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 37.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 36.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 36.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 35.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 35.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 34.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 34.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 34.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 34.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 34.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 33.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 33.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 33.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 33.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 33.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 32.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 32.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 32.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 31.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 31.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 31.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 30.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 30.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 30.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 30.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 30.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 30.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 29.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 29.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 29.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 29.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 29.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 29.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 28.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 28.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 28.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 28.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 28.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 28.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 28.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 28.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 28.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 28.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 28.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 27.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 27.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 26.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 26.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 26.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 26.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 26.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 26.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 25.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 25.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 25.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 25.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 24.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 24.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 24.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 23.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 23.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 23.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 23.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 23.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 23.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 23.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 23.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 22.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 22.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 22.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 22.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 22.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 22.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 21.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 21.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 21.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 20.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 20.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 20.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 20.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 19.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 19.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 19.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 19.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 18.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 18.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 18.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 18.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 18.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 18.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 18.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 17.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 17.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 17.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 17.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 17.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 17.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 17.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 17.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 16.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 16.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 16.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 16.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 16.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 16.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 16.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 16.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 16.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 16.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 15.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 15.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 15.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 15.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 15.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 14.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 14.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 14.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 14.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 14.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 14.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 13.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 13.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 13.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 12.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 12.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 12.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 12.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 8.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 25.3
FF:10176-103C5 60 years, female 25.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.9
Pig sample Sample description nTPM
Putamen
nTPM: 5.9
Samples: 3

Max nTPM: 6.0
Min nTPM: 5.8
Sample B Female 5.9
Sample C Male 5.8
Sample D Male 6.0

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