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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • CELL LINE

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  • EVOLUTION

  • PAM16
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:11.5 nTPM
GTEx:41.3 nTPM
FANTOM5:27.8 Scaled Tags Per Million
Pig:76.6 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.5
Sample id Sample description nTPM
Putamen
nTPM: 11.5
1838 Male, age 80, right hemisphere 15.5
1937 Female, age 91, right hemisphere 13.1
2489 Female, age 72, unknown 12.7
2466 Female, age 79, unknown 12.3
2647 Male, age 75, left hemisphere 11.4
2482 Female, age 94, left hemisphere 9.4
1829 Male, age 74, unknown 5.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 41.3
Samples: 254

Max nTPM: 89.9
Min nTPM: 9.8
Std nTPM: 12.1
Median nTPM: 40.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 89.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 80.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 74.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 71.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 70.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 69.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 67.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 66.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 66.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 65.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 64.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 64.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 63.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 63.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 62.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 61.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 61.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 60.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 59.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 59.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 59.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 59.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 58.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 58.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 58.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 57.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 57.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 57.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 56.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 55.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 55.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 55.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 55.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 54.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 54.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 53.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 53.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 53.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 53.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 53.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 52.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 52.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 52.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 51.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 51.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 51.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 51.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 51.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 50.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 49.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 49.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 49.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 49.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 49.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 49.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 49.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 49.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 49.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 48.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 48.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 48.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 47.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 47.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 47.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 47.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 46.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 46.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 46.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 46.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 46.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 46.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 46.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 45.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 45.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 45.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 45.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 45.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 45.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 45.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 45.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 45.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 45.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 45.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 45.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 45.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 44.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 44.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 44.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 44.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 44.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 44.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 44.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 44.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 44.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 43.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 43.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 43.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 43.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 43.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 42.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 42.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 42.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 42.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 42.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 42.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 41.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 41.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 41.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 41.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 41.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 40.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 40.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 40.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 40.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 40.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 39.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 39.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 39.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 39.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 39.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 39.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 38.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 38.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 38.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 38.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 37.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 37.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 37.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 37.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 37.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 37.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 37.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 37.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 36.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 36.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 36.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 36.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 36.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 36.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 36.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 35.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 35.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 35.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 35.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 35.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 35.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 35.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 34.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 34.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 34.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 34.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 34.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 34.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 33.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 33.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 33.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 33.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 33.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 33.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 33.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 33.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 33.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 32.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 32.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 32.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 32.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 32.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 31.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 31.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 31.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 31.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 31.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 31.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 31.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 31.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 31.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 31.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 30.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 30.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 30.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 30.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 30.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 30.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 29.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 29.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 29.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 29.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 29.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 29.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 29.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 29.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 29.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 28.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 28.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 28.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 27.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 27.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 27.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 27.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 27.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 27.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 26.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 25.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 25.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 25.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 25.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 24.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 24.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 23.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 23.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 23.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 23.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 23.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 23.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 22.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 21.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 21.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 21.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 19.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 9.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 27.8
FF:10176-103C5 60 years, female 27.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.6
Pig sample Sample description nTPM
Putamen
nTPM: 76.6
Samples: 3

Max nTPM: 95.9
Min nTPM: 58.3
Sample B Female 58.3
Sample C Male 95.9
Sample D Male 75.6

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