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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • UBA52
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:359.4 nTPM
GTEx:704.5 nTPM
FANTOM5:239.2 Scaled Tags Per Million
Macaque:405.8 nTPM
Pig:1434.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

359.4
Sample id Sample description nTPM
Putamen
nTPM: 359.4
2466 Female, age 79, unknown 434.3
1937 Female, age 91, right hemisphere 365.9
2482 Female, age 94, left hemisphere 364.8
1838 Male, age 80, right hemisphere 353.3
2647 Male, age 75, left hemisphere 347.5
2489 Female, age 72, unknown 326.0
1829 Male, age 74, unknown 323.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

704.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 704.5
Samples: 254

Max nTPM: 1478.3
Min nTPM: 387.7
Std nTPM: 189.1
Median nTPM: 665.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1478.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1468.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1433.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1411.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1280.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1206.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1196.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1124.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1107.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1078.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1074.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1062.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1058.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1055.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1028.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1025.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1019.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1016.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1005.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1003.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1002.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 994.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 993.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 987.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 942.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 927.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 925.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 923.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 920.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 919.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 918.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 915.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 902.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 901.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 898.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 887.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 880.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 869.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 864.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 863.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 863.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 861.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 856.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 847.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 846.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 844.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 843.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 840.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 840.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 840.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 835.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 829.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 827.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 825.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 822.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 818.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 816.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 815.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 810.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 808.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 807.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 805.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 804.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 798.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 793.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 792.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 787.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 774.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 772.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 772.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 772.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 767.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 765.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 765.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 763.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 763.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 757.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 756.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 755.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 753.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 751.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 750.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 746.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 744.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 744.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 741.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 740.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 738.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 734.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 733.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 732.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 731.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 731.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 730.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 730.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 728.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 728.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 724.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 721.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 716.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 710.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 709.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 704.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 698.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 696.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 694.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 693.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 693.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 690.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 689.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 687.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 686.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 686.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 684.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 684.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 680.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 679.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 678.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 676.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 676.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 675.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 671.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 670.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 669.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 668.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 667.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 666.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 665.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 665.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 663.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 663.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 662.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 659.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 659.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 657.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 657.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 655.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 654.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 651.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 651.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 648.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 647.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 647.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 645.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 645.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 642.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 639.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 636.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 632.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 630.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 629.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 627.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 627.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 626.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 625.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 619.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 618.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 616.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 616.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 614.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 612.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 611.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 610.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 610.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 610.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 609.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 608.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 607.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 607.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 607.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 605.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 605.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 605.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 602.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 601.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 601.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 600.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 599.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 598.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 595.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 595.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 591.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 590.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 589.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 589.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 585.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 584.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 584.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 582.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 581.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 581.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 580.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 579.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 578.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 571.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 568.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 566.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 566.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 565.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 564.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 564.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 563.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 559.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 558.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 557.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 557.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 552.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 551.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 550.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 550.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 547.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 545.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 542.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 540.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 539.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 538.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 534.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 533.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 532.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 531.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 530.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 525.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 521.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 515.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 510.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 509.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 507.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 503.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 503.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 502.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 500.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 496.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 495.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 489.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 481.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 481.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 476.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 476.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 476.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 475.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 468.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 467.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 466.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 461.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 458.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 452.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 437.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 437.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 432.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 428.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 421.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 407.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 393.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 387.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

239.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 239.2
FF:10176-103C5 60 years, female 239.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

405.8
Macaque sample Sample description nTPM
Putamen
nTPM: 405.8
Samples: 2

Max nTPM: 452.5
Min nTPM: 359.1
Sample A 359.1
Sample B 452.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1434.3
Pig sample Sample description nTPM
Putamen
nTPM: 1434.4
Samples: 3

Max nTPM: 1621.3
Min nTPM: 1106.5
Sample B Female 1106.5
Sample C Male 1621.3
Sample D Male 1575.3

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