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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • CELL LINE

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  • EVOLUTION

  • MCRIP1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:45.2 nTPM
GTEx:120.0 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:72.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.2
Sample id Sample description nTPM
Putamen
nTPM: 45.2
2647 Male, age 75, left hemisphere 64.1
2466 Female, age 79, unknown 46.1
2489 Female, age 72, unknown 45.6
2482 Female, age 94, left hemisphere 43.2
1829 Male, age 74, unknown 42.1
1937 Female, age 91, right hemisphere 39.6
1838 Male, age 80, right hemisphere 35.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 120.0
Samples: 254

Max nTPM: 259.2
Min nTPM: 43.7
Std nTPM: 34.4
Median nTPM: 115.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 259.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 241.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 238.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 208.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 204.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 204.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 199.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 196.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 194.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 193.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 191.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 190.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 190.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 183.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 180.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 178.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 176.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 175.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 171.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 170.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 167.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 167.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 165.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 165.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 164.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 164.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 163.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 162.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 162.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 162.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 161.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 160.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 160.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 159.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 157.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 156.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 156.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 155.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 155.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 154.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 152.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 152.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 152.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 151.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 149.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 149.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 149.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 147.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 147.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 146.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 145.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 145.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 145.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 144.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 144.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 143.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 142.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 142.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 142.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 141.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 141.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 141.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 140.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 139.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 139.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 139.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 138.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 138.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 137.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 136.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 136.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 136.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 135.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 135.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 135.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 134.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 134.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 134.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 132.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 132.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 132.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 131.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 130.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 130.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 130.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 130.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 129.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 129.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 129.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 128.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 127.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 127.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 127.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 126.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 126.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 126.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 125.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 124.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 124.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 124.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 124.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 123.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 123.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 122.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 122.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 121.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 121.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 121.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 121.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 121.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 121.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 121.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 120.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 120.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 119.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 119.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 118.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 118.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 118.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 117.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 117.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 117.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 116.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 116.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 115.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 115.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 115.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 115.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 114.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 114.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 114.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 114.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 113.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 112.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 112.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 111.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 111.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 111.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 111.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 110.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 110.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 110.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 109.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 109.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 107.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 107.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 106.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 106.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 106.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 105.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 105.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 105.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 104.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 104.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 104.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 104.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 103.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 102.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 102.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 102.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 102.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 102.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 102.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 101.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 101.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 101.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 101.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 101.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 101.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 101.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 101.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 101.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 101.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 100.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 99.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 99.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 99.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 98.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 98.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 97.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 97.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 97.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 96.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 96.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 96.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 96.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 95.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 95.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 95.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 95.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 94.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 94.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 94.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 93.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 93.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 93.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 92.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 92.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 91.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 91.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 91.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 91.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 91.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 90.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 90.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 89.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 88.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 88.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 88.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 88.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 87.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 87.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 86.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 86.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 86.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 86.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 86.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 85.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 85.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 85.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 84.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 84.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 84.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 83.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 82.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 82.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 82.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 82.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 82.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 82.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 81.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 81.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 79.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 79.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 77.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 77.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 76.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 76.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 76.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 75.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 72.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 72.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 72.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 71.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 70.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 70.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 68.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 65.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 60.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 52.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 43.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 34.8
FF:10176-103C5 60 years, female 34.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.6
Pig sample Sample description nTPM
Putamen
nTPM: 72.6
Samples: 3

Max nTPM: 79.5
Min nTPM: 66.0
Sample B Female 66.0
Sample C Male 72.3
Sample D Male 79.5

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