HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:506.0 nTPM
HPA Brain:29.3 nTPM
GTEx:506.0 nTPM
FANTOM5:58.6 Scaled Tags Per Million
Pig:65.4 nTPM
Mouse:307.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063979
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 29.3
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1898 Male, age 80, left hemisphere 28.6
2148 Female, age 91, left hemisphere 27.0
2621 Female, age 67, right hemisphere 26.8
1855 Male, age 76, left hemisphere 25.8
2529 Female, age 94, left hemisphere 25.1
1911 Female, age 85, right hemisphere 24.1
Dentate gyrus
nTPM: 25.4
2530 Female, age 94, left hemisphere 34.5
1927 Female, age 91, both hemispheres 30.7
2246 Female, age 85, both hemispheres 27.7
2010 Male, age 76, both hemispheres 26.7
2531 Female, age 67, both hemispheres 18.5
2528 Male, age 74, both hemispheres 14.3
Entorhinal gyrus
nTPM: 29.3
2686 Male, age 75, right hemisphere 40.7
1938 Female, age 85, left hemisphere 35.9
2117 Female, age 91, right hemisphere 28.3
2764 Male, age 80, right hemisphere 26.5
1787 Male, age 76, left hemisphere 24.7
2613 Female, age 94, left hemisphere 19.8
Hippocampus, CA1
nTPM: 26.3
2082 Female, age 91, right hemisphere 29.2
2749 Male, age 80, left hemisphere 28.6
2045 Male, age 76, both hemispheres 26.1
2527 Male, age 74, both hemispheres 24.1
1873 Female, age 85, both hemispheres 23.4
Hippocampus, CA2
nTPM: 27.9
1892 Male, age 76, both hemispheres 32.6
1940 Female, age 85, left hemisphere 30.2
1963 Male, age 80, left hemisphere 29.4
2113 Female, age 91, right hemisphere 28.0
2437 Female, age 94, left hemisphere 26.8
2249 Male, age 74, both hemispheres 20.5
Hippocampus, CA3
nTPM: 25.9
1891 Female, age 85, both hemispheres 32.8
2137 Male, age 80, left hemisphere 32.5
1867 Male, age 76, both hemispheres 28.2
2436 Male, age 74, both hemispheres 22.7
2861 Female, age 67, both hemispheres 21.8
2620 Female, age 94, left hemisphere 17.3
Parahippocampal cortex
nTPM: 27.6
2693 Female, age 94, both hemispheres 34.9
1990 Female, age 91, right hemisphere 31.5
2532 Female, age 72, left hemisphere 30.1
2018 Male, age 76, both hemispheres 29.2
2622 Female, age 67, right hemisphere 29.0
1933 Female, age 85, both hemispheres 28.2
2245 Female, age 91, both hemispheres 26.6
1850 Male, age 80, both hemispheres 26.4
2250 Female, age 67, right hemisphere 22.2
2692 Male, age 74, both hemispheres 17.6
Perirhinal gyrus
nTPM: 24.6
1841 Female, age 85, right hemisphere 29.1
1794 Male, age 80, right hemisphere 26.9
2848 Male, age 76, right hemisphere 25.5
1847 Female, age 91, left hemisphere 24.8
2521 Female, age 94, right hemisphere 16.5
Subiculum
nTPM: 25.6
1901 Male, age 80, both hemispheres 40.8
2042 Male, age 76, both hemispheres 34.6
1977 Female, age 85, both hemispheres 24.9
2619 Male, age 74, both hemispheres 23.3
2729 Female, age 91, right hemisphere 19.8
2438 Female, age 94, left hemisphere 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 506.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 506.0
Samples: 255

Max nTPM: 1671.4
Min nTPM: 210.6
Std nTPM: 184.3
Median nTPM: 461.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1671.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1525.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1128.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1081.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1057.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 990.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 955.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 831.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 816.7
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 809.7
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 802.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 58.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.6
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 39.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 65.4
Pig sample Sample description nTPM
Subiculum
nTPM: 52.7
Samples: 4

Max nTPM: 71.6
Min nTPM: 44.8
Sample A Female 71.6
Sample B Female 49.3
Sample C Male 45.0
Sample D Male 44.8
Dorsal hippocampus
nTPM: 65.4
Samples: 4

Max nTPM: 85.7
Min nTPM: 46.7
Sample A Female 85.7
Sample B Female 59.9
Sample C Male 69.2
Sample D Male 46.7
Entorhinal cortex
nTPM: 51.6
Samples: 4

Max nTPM: 63.0
Min nTPM: 40.3
Sample A Female 51.9
Sample B Female 63.0
Sample C Male 51.3
Sample D Male 40.3
Ventral hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 61.8
Min nTPM: 47.2
Sample A Female 59.9
Sample B Female 48.1
Sample C Male 47.2
Sample D Male 61.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 307.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 293.7
Samples: 4

Max nTPM: 303.2
Min nTPM: 280.4
Sample A Male 280.4
Sample B Male 295.8
Sample C Female 303.2
Sample D Female 295.3
Hippocampal formation
nTPM: 307.1
Samples: 4

Max nTPM: 359.8
Min nTPM: 266.2
Sample A Male 359.8
Sample B Male 266.2
Sample C Female 296.7
Sample D Female 305.5

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