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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • DBNDD2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:410.8 nTPM
GTEx:566.7 nTPM
FANTOM5:140.4 Scaled Tags Per Million
Pig:72.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

410.8
Sample id Sample description nTPM
Putamen
nTPM: 410.8
2482 Female, age 94, left hemisphere 534.1
1829 Male, age 74, unknown 526.4
2647 Male, age 75, left hemisphere 486.7
1937 Female, age 91, right hemisphere 410.1
2489 Female, age 72, unknown 400.8
2466 Female, age 79, unknown 345.3
1838 Male, age 80, right hemisphere 172.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

566.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 566.7
Samples: 254

Max nTPM: 2333.5
Min nTPM: 124.9
Std nTPM: 263.8
Median nTPM: 534.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 2333.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1825.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1680.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1323.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1236.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1160.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1098.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1035.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 1011.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1009.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1009.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 993.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 957.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 945.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 931.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 916.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 908.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 905.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 899.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 897.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 897.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 897.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 897.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 896.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 893.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 891.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 887.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 880.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 868.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 836.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 829.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 827.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 827.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 804.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 803.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 796.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 795.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 792.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 791.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 790.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 782.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 769.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 768.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 767.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 755.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 751.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 745.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 745.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 743.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 743.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 738.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 729.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 726.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 718.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 712.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 711.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 710.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 703.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 700.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 697.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 695.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 691.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 689.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 688.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 685.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 683.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 677.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 673.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 672.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 669.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 669.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 666.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 654.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 650.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 650.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 646.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 646.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 645.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 645.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 642.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 641.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 639.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 637.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 634.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 630.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 630.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 627.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 624.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 624.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 621.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 619.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 617.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 615.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 607.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 607.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 603.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 602.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 601.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 598.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 597.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 596.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 594.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 588.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 586.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 586.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 583.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 580.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 579.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 579.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 578.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 575.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 567.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 566.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 565.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 564.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 563.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 561.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 558.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 554.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 553.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 550.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 549.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 545.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 543.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 542.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 539.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 535.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 532.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 528.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 523.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 520.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 520.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 520.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 518.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 516.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 514.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 512.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 512.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 511.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 510.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 508.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 508.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 507.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 505.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 504.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 498.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 498.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 496.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 492.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 490.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 480.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 478.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 475.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 472.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 467.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 463.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 461.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 460.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 460.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 458.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 455.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 451.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 449.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 445.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 444.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 443.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 442.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 441.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 439.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 436.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 429.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 429.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 428.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 421.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 418.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 415.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 415.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 415.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 414.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 413.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 403.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 402.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 402.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 397.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 397.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 397.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 395.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 393.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 392.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 392.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 389.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 388.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 383.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 381.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 379.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 377.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 374.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 373.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 370.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 368.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 366.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 365.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 364.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 363.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 359.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 355.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 351.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 346.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 344.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 342.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 339.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 336.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 329.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 324.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 322.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 320.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 314.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 313.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 310.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 309.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 309.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 308.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 300.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 297.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 296.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 295.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 294.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 292.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 288.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 288.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 287.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 283.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 282.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 281.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 281.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 279.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 270.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 268.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 255.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 254.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 254.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 250.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 246.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 239.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 219.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 218.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 214.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 209.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 198.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 197.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 183.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 165.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 163.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 124.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

140.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 140.4
FF:10176-103C5 60 years, female 140.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.5
Pig sample Sample description nTPM
Putamen
nTPM: 72.4
Samples: 3

Max nTPM: 88.4
Min nTPM: 52.8
Sample B Female 52.8
Sample C Male 76.1
Sample D Male 88.4

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