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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • PCP4L1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:121.9 nTPM
GTEx:135.3 nTPM
FANTOM5:381.1 Scaled Tags Per Million
Pig:215.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.9
Sample id Sample description nTPM
Putamen
nTPM: 121.9
1838 Male, age 80, right hemisphere 224.9
1937 Female, age 91, right hemisphere 211.3
1829 Male, age 74, unknown 120.2
2466 Female, age 79, unknown 92.3
2647 Male, age 75, left hemisphere 74.4
2482 Female, age 94, left hemisphere 69.1
2489 Female, age 72, unknown 60.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 135.3
Samples: 254

Max nTPM: 511.6
Min nTPM: 4.4
Std nTPM: 112.7
Median nTPM: 107.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 511.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 460.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 428.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 394.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 389.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 380.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 377.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 374.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 373.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 370.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 369.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 367.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 355.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 350.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 344.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 339.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 337.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 334.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 332.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 327.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 323.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 314.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 312.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 306.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 301.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 295.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 292.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 291.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 284.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 284.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 283.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 280.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 280.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 278.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 274.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 270.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 268.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 267.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 266.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 265.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 262.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 258.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 258.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 254.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 253.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 252.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 246.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 246.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 244.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 238.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 236.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 234.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 234.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 231.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 230.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 225.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 224.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 222.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 221.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 218.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 218.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 217.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 216.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 210.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 210.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 210.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 209.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 209.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 203.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 203.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 202.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 201.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 194.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 192.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 192.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 192.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 191.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 187.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 187.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 185.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 183.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 182.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 178.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 178.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 175.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 175.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 173.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 169.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 169.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 169.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 167.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 167.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 161.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 161.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 161.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 161.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 159.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 157.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 154.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 151.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 149.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 149.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 148.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 148.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 147.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 146.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 146.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 144.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 143.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 140.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 140.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 137.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 136.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 129.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 125.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 122.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 121.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 118.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 117.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 116.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 116.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 116.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 114.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 114.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 112.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 110.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 108.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 107.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 106.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 105.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 104.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 104.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 103.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 103.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 101.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 101.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 98.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 97.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 97.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 97.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 96.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 95.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 91.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 89.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 86.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 86.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 83.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 83.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 82.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 81.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 81.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 78.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 76.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 74.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 74.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 73.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 71.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 64.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 63.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 63.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 62.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 60.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 57.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 57.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 56.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 54.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 52.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 50.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 48.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 47.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 47.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 41.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 38.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 37.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 37.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 37.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 36.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 35.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 35.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 34.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 34.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 34.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 34.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 33.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 32.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 32.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 31.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 31.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 30.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 29.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 29.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 28.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 28.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 28.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 27.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 25.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 24.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 23.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 22.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 22.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 22.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 21.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 21.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 21.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 19.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 17.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 17.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 17.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 17.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 17.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 16.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 16.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 15.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 15.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 15.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 15.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 15.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 14.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 14.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 14.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 13.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 11.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 11.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 10.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 9.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 8.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 8.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 7.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 4.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

381.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 381.1
FF:10176-103C5 60 years, female 381.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.7
Pig sample Sample description nTPM
Putamen
nTPM: 215.7
Samples: 3

Max nTPM: 354.4
Min nTPM: 140.6
Sample B Female 140.6
Sample C Male 354.4
Sample D Male 152.0

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