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  • TISSUE

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  • CHMP4A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:65.8 nTPM
HPA Brain:27.7 nTPM
GTEx:65.8 nTPM
Pig:6.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.5
2226 Male, age 75, left hemisphere 20.4
1961 Female, age 42, unknown 18.6
Dorsomedial nucleus
nTPM: 21.9
1989 Male, age 62, unknown 26.0
2041 Female, age 72, unknown 20.7
2017 Female, age 42, unknown 19.0
Lateral hypothalamic area
nTPM: 24.8
1791 Male, age 80, right hemisphere 26.6
2228 Male, age 66, unknown 25.0
2271 Male, age 75, both hemispheres 24.6
2412 Male, age 62, unknown 22.8
Mammillary body
nTPM: 26.5
1945 Male, age 80, right hemisphere 33.4
1948 Female, age 72, unknown 28.1
1834 Female, age 42, unknown 26.0
2413 Male, age 66, unknown 24.9
1923 Female, age 72, unknown 19.9
Paraventricular nucleus
nTPM: 27.7
2700 Male, age 62, unknown 27.7
Preoptic area
nTPM: 23.6
1861 Female, age 42, unknown 29.2
2414 Female, age 72, unknown 23.1
1907 Male, age 80, right hemisphere 18.5
Supraoptic nucleus
nTPM: 23.5
2835 Female, age 72, unknown 26.3
1894 Female, age 72, unknown 23.6
2043 Male, age 62, unknown 20.7
Ventromedial nucleus
nTPM: 17.0
1982 Female, age 72, unknown 18.9
1822 Female, age 42, unknown 15.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 65.8
Samples: 257

Max nTPM: 171.1
Min nTPM: 27.6
Std nTPM: 25.2
Median nTPM: 58.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 171.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 159.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 158.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 150.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 140.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 139.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 138.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 138.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 136.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 128.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 124.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 122.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 119.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 117.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 114.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 111.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 111.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 110.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 109.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 108.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 108.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 106.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 104.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 101.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 100.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 100.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 94.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 93.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 93.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 92.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 92.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 92.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 91.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 91.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 91.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 90.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 90.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 90.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 90.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 89.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 89.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 88.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 87.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 86.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 85.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 83.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 83.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 83.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 83.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 83.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 81.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 80.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 80.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 80.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 79.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 78.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 77.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 76.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 75.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 74.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 74.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 74.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 74.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 74.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 73.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 73.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 73.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 72.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 72.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 72.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 72.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 71.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 71.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 70.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 70.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 70.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 70.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 69.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 69.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 68.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 68.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 68.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 68.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 67.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 67.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 67.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 66.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 66.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 66.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 66.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 66.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 66.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 66.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 65.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 65.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 65.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 65.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 65.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 65.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 65.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 64.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 64.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 64.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 64.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 64.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 64.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 64.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 64.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 63.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 63.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 63.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 63.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 62.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 62.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 62.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 62.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 62.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 62.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 61.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 59.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 59.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 58.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 58.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 58.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 58.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 58.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 58.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 58.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 57.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 57.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 57.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 57.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 57.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 56.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 56.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 56.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 56.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 56.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 56.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 56.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 55.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 55.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 55.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 55.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 55.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 55.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 55.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 55.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 54.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 54.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 54.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 53.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 53.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 53.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 53.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 53.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 53.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 53.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 53.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 53.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 53.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 52.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 52.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 52.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 52.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 52.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 52.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 52.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 52.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 52.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 52.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 52.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 52.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 52.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 51.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 51.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 51.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 51.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 51.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 51.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 51.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 50.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 50.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 50.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 50.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 50.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 50.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 50.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 49.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 49.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 49.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 49.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 48.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 48.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 48.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 48.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 47.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 47.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 47.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 47.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 47.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 46.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 46.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 46.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 46.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 45.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 45.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 45.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 45.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 45.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 44.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 44.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 44.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 44.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 44.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 44.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 44.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 43.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 43.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 43.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 43.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 43.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 42.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 42.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 42.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 42.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 41.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 41.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 41.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 40.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 40.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 40.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 40.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 40.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 39.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 39.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 39.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 39.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 38.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 38.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 38.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 37.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 37.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 37.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 36.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 35.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 33.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 29.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 28.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 28.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 27.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 27.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.8
Sample A Female 6.2
Sample B Female 5.9
Sample C Male 6.5
Sample D Male 5.8

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